Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_K11
(652 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1250.02 |mug95||sequence orphan|Schizosaccharomyces pombe|ch... 33 0.047
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 0.77
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 28 1.3
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 27 1.8
SPAC19G12.01c |cut20|lid1, apc4, SPAPJ698.04c|anaphase-promoting... 27 3.1
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 26 4.1
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 26 5.4
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 5.4
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 25 7.2
SPBC1734.10c |||mRNA processing protein |Schizosaccharomyces pom... 25 7.2
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 25 9.5
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 25 9.5
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 9.5
SPBC1105.08 |||EMP70 family|Schizosaccharomyces pombe|chr 2|||Ma... 25 9.5
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa... 25 9.5
>SPAC1250.02 |mug95||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 178
Score = 32.7 bits (71), Expect = 0.047
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 56 INSWEFSCLCLVHDCLSKPTTEHDPFRGRGIGSTIWGWITY 178
+ W F C+C + L+ P + P+R RGI T + W+TY
Sbjct: 13 LTKWFFCCVCTI---LTMPFFKK-PYRKRGISRTPYEWLTY 49
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 28.7 bits (61), Expect = 0.77
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +2
Query: 398 NTITPADTSRPTEVNTKPENDLSTLKPTTTII-ISTLQPSSVPIASGLEXVNSTVEERPL 574
NT DTS + NDL PTTT I + +P + I + L NS R L
Sbjct: 1669 NTELNEDTSAVSRNLENATNDLKETFPTTTTISTARAKPGNNDINTILRRNNSRGRRRML 1728
Query: 575 -QLEAVLSSTVMGTDNL 622
Q+ + S+ GT++L
Sbjct: 1729 QQMSPLKSNKFSGTNDL 1745
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +2
Query: 200 GEPELAPGSDQLLAIGPDNI--IXIGKHNVTIWCNDQTCTTMKCDRISCRNVTCNIYDTD 373
G+ L+P + A+ P+ + IG+ +T+W + T ++C+ + D
Sbjct: 227 GDSSLSPQGLKYAALLPEYVAKFSIGEKGLTVWTSSMARTIQTARHLNCQKLEWRALDEL 286
Query: 374 ITGXC 388
G C
Sbjct: 287 DAGTC 291
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 407 TPADTSRPTEVNTKPENDLSTLKPTTTIIISTLQPSSVPI 526
TP T PTE T P +ST TT ++ + S++P+
Sbjct: 506 TPKSTDTPTEATTSPVK-VSTKNSNTTENLNGINESNMPM 544
>SPAC19G12.01c |cut20|lid1, apc4, SPAPJ698.04c|anaphase-promoting
complex subunit Apc4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 719
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 497 STLQPSSVPIASGLEXVNSTV-EERPLQLEAVLSSTVMGTDNLGSKD 634
+T +PSS+P +E +N TV R + L+S MGT L +D
Sbjct: 441 NTSEPSSIPPQEIIEHINETVIYIRHSLFRSKLTSYFMGTKPLQLRD 487
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 26.2 bits (55), Expect = 4.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 464 STLKPTTTIIISTLQPSSVPIASGLEXVNSTVEERPLQLEAVLSSTVMGTDNLGSKD*QR 643
ST++ + QP+SVP++ E V S + + L++E+ + ++GT G QR
Sbjct: 972 STVREALRFSAALRQPASVPLSEKYEYVESVI--KLLEMES-YAEAIIGTPGSGLNVEQR 1028
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 25.8 bits (54), Expect = 5.4
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Frame = +2
Query: 404 ITPADT--SRPTEVNTKPE----NDLSTLKPTTTIIISTLQPSSVPIASGLEXVNSTVEE 565
++PADT S T + P+ + L++L + T+ PSS+ S V T +E
Sbjct: 184 LSPADTNISNATSIIEHPDAANAHTLASLNQPPKHL--TVSPSSIQRLSPQPYVRPTSDE 241
Query: 566 RPLQLEAVLSS 598
RP++ ++ +S+
Sbjct: 242 RPIETDSSVSA 252
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 410 PADTSRPTEVNTKPENDLSTLKPTTTIIISTLQPSS 517
P T+ + NT P N T KP+T I+T P++
Sbjct: 231 PRPTTSASNTNTSPANGAPTNKPSTD--INTTDPAT 264
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 181 RVSYPSPYSRPDPTTPKR 128
+ SY SPY+RP TT +R
Sbjct: 354 KASYISPYARPGITTSRR 371
>SPBC1734.10c |||mRNA processing protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 332
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 621 KLSVPITVDDKTASNCKGRSSTVELTXSSPLAIGTDE 511
K +P+T+ T N RS T++L S P +DE
Sbjct: 31 KFPLPLTLSRSTPINPIIRSDTIQLVISCPPVTYSDE 67
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 111 GLLRQSCTKHKQENSQEFIT 52
GL+ +CT+++ NSQ FIT
Sbjct: 97 GLVGMACTENEGNNSQFFIT 116
>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 175 SYPSPYSRPDPTTPKRVMFSRRFA 104
S SPY+ PD T P+ + ++R A
Sbjct: 502 SKDSPYNMPDLTVPEYMRLAKRIA 525
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 202 T*TPPCERVSYPSPYSRPDPTTP 134
T PP ++ S+P+PY+ P +P
Sbjct: 943 TRVPPVQQPSHPNPYTPVAPQSP 965
>SPBC1105.08 |||EMP70 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 629
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +2
Query: 392 EYNTITPADTSRPTEVNTKPENDLSTLKPTTTIIISTLQPSSVPIASGLEXVNS 553
EY+T T +D R KP + STL + S+ P +P + L V S
Sbjct: 185 EYHT-TSSDQHRVVGAYVKPVSKESTLVDGNPVCSSSSNPQYLPEGADLTLVTS 237
>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 440
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 621 KLSVPITVDDKTASNCKGRSSTVELTXSSPLAI 523
K V + DD T +N K S +EL ++ L +
Sbjct: 313 KTKVEVIADDLTVTNVKRLSKAIELKCANALLV 345
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,605,371
Number of Sequences: 5004
Number of extensions: 52503
Number of successful extensions: 173
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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