Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_K11
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 34 0.10
AC024755-2|AAL65800.1| 498|Caenorhabditis elegans Hypothetical ... 32 0.41
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 30 1.6
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 2.9
U23486-2|AAL38957.1| 318|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin reu... 29 3.8
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 29 3.8
AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of... 29 3.8
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 28 5.0
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 28 5.0
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 5.0
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 5.0
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 28 6.6
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 6.6
AF016427-10|AAB65348.1| 301|Caenorhabditis elegans Hypothetical... 28 6.6
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 28 6.6
Z81111-8|CAB03271.1| 238|Caenorhabditis elegans Hypothetical pr... 27 8.7
AL032662-1|CAA21758.1| 238|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 33.9 bits (74), Expect = 0.10
Identities = 35/156 (22%), Positives = 52/156 (33%), Gaps = 7/156 (4%)
Frame = +2
Query: 182 FTWWSSGEPELAPGSDQLLAIGPDNIIXIGKHNVT-----IWCNDQTCTTMKCDRISCRN 346
+ WW G P + I +++ + V IW T C R +
Sbjct: 174 YLWWQPGYPGSGDPEKSCVTIWVTSLLKLNPGYVQGQFDDIWDCGTNLATPTC-RYDPTS 232
Query: 347 VTCNI-YDTDIT-GXCXEYNTITPADTSRPTEVNTKPENDLSTLKPTTTIIISTLQPSSV 520
+I YDT T +T + T++PT T P +T PTTT T P++
Sbjct: 233 TAPHIKYDTSYTCASTTTVSTTSTVTTTKPTTTTTTPTT--TTTTPTTTTTTPTTTPTTT 290
Query: 521 PIASGLEXVNSTVEERPLQLEAVLSSTVMGTDNLGS 628
ST E ++T T S
Sbjct: 291 TTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTAS 326
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/71 (29%), Positives = 27/71 (38%)
Frame = +2
Query: 305 TCTTMKCDRISCRNVTCNIYDTDITGXCXEYNTITPADTSRPTEVNTKPENDLSTLKPTT 484
T TT+ + T T T T TPA T+ T T +T KPTT
Sbjct: 212 TTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTT 271
Query: 485 TIIISTLQPSS 517
T T P++
Sbjct: 272 TTTTPTTTPTT 282
>AC024755-2|AAL65800.1| 498|Caenorhabditis elegans Hypothetical
protein Y34B4A.10 protein.
Length = 498
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 401 TITPADTSRPTEVNTKPENDLSTLKPTTTIIIST 502
T PA+ + PTE+ T+P + +T PTTT IST
Sbjct: 264 TEAPAEVTVPTEIVTEPTTESAT-TPTTTTTIST 296
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 398 NTITPADTSRPTEVNTKPE--NDLSTLKPTTTIIISTLQPSSVP 523
N T T PT N K E ++ ++ PTTT +TL+P++ P
Sbjct: 192 NETTSVTTQNPTTSNQKNETTDEATSSPPTTTTPTTTLKPTTSP 235
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 2.9
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Frame = +2
Query: 344 NVTCNIYDTDITGXCXEYNTITPADTSRPTEVNTKPE-----NDLSTLKPTTTIIISTLQ 508
N C+ D T +T T P+ T E + ++T +PTTT+ ST
Sbjct: 379 NAICSYLDETTTSTTFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTAS 438
Query: 509 PSSV-PIASGLEXVNSTVEERPLQLEAVLSSTVMGT 613
S+ P S + ST + SST + T
Sbjct: 439 TSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTT 474
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 398 NTITPADTSRPTEVNTKPENDLSTLKPTTTIIISTLQPSSVPIASGL--EXVNSTVEERP 571
+T + T+ PT T ST +P+T+ + T PS+ P+ S + +ST P
Sbjct: 418 STSSTVTTTEPTTTLTTSTASTSTTEPSTSTV--TTSPSTSPVTSTVTSSSSSSTTVTTP 475
Query: 572 LQLEAVLSS 598
E+ +S
Sbjct: 476 TSTESTSTS 484
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 2.9
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Frame = +2
Query: 344 NVTCNIYDTDITGXCXEYNTITPADTSRPTEVNTKPE-----NDLSTLKPTTTIIISTLQ 508
N C+ D T +T T P+ T E + ++T +PTTT+ ST
Sbjct: 379 NAICSYLDETTTSTTFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTAS 438
Query: 509 PSSV-PIASGLEXVNSTVEERPLQLEAVLSSTVMGT 613
S+ P S + ST + SST + T
Sbjct: 439 TSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTT 474
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 398 NTITPADTSRPTEVNTKPENDLSTLKPTTTIIISTLQPSSVPIASGL--EXVNSTVEERP 571
+T + T+ PT T ST +P+T+ + T PS+ P+ S + +ST P
Sbjct: 418 STSSTVTTTEPTTTLTTSTASTSTTEPSTSTV--TTSPSTSPVTSTVTSSSSSSTTVTTP 475
Query: 572 LQLEAVLSS 598
E+ +S
Sbjct: 476 TSTESTSTS 484
>U23486-2|AAL38957.1| 318|Caenorhabditis elegans Hypothetical
protein F07F6.8 protein.
Length = 318
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 494 ISTLQPSSVPIASGLEXVNSTVEERPLQLEAVLSSTVMGTDNLGS 628
IST S+V IASG+ + + P+ + ++ T G NL +
Sbjct: 80 ISTAVGSTVGIASGIAVIGGLILMPPVAIAGLIVGTASGVSNLAT 124
>AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin
reuptake transporter protein.
Length = 671
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -1
Query: 403 CIVFXTLSGNVGVINITGNVSATDSVAFHSCASLIIAPYCNVMFTDXYNVVWSY 242
C+VF TL G +++ N + V H ASLI Y + T Y+ WS+
Sbjct: 402 CVVFSTL----GYMSLLTNKPINEVVGEHD-ASLIFIVYPQALATMDYSCFWSF 450
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +2
Query: 434 EVNTKPEN---DLSTLKPTTTIIISTLQPSSVPIASGLEXVNSTVEERPLQLEAVLSST 601
E +T+PE +T +PTTT +T ++VP ++ ST P S+T
Sbjct: 261 ETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTTTTTPTTTTTTTSTT 319
>AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 5 protein.
Length = 671
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -1
Query: 403 CIVFXTLSGNVGVINITGNVSATDSVAFHSCASLIIAPYCNVMFTDXYNVVWSY 242
C+VF TL G +++ N + V H ASLI Y + T Y+ WS+
Sbjct: 402 CVVFSTL----GYMSLLTNKPINEVVGEHD-ASLIFIVYPQALATMDYSCFWSF 450
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 407 TPADTSRPTEVNTKPENDLSTLKPTTTIIISTLQPSSVPIASGLEXVNSTVEERPLQL 580
TP T+ T KP ST TTT ++ ++ P + +T E+P+ L
Sbjct: 607 TPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTP-----QPTTTTTSEKPVTL 659
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 407 TPADTSRPTEVNTKPENDLSTLKPTTTIIISTLQPSSVPIASGLEXVNSTVEERPLQL 580
TP T+ T KP ST TTT ++ ++ P + +T E+P+ L
Sbjct: 607 TPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTP-----QPTTTTTSEKPVTL 659
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = +2
Query: 401 TITPADTSRPT----EVNTKPENDLSTLKP--TTTIIISTLQPSSVPIASGLEXVNSTVE 562
T T A ++PT T P T +P TTT +++TL +VP+ + + ++TV
Sbjct: 535 TQTTAPVTKPTVPSSTTQTAPPVTTPTSQPPVTTTSLLTTLTTPTVPVTTTVVPSSATVP 594
Query: 563 ERPLQLEAVLSST 601
P V ++T
Sbjct: 595 TTPPTTVTVAATT 607
Score = 28.3 bits (60), Expect = 5.0
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 305 TCTTMKCDRISCRNVTCNIYDTDITGXCXEYNTITPADTSRP-TEVNTKPENDLSTLKPT 481
T TT + T T T +TITP T+RP T+ ++P +T PT
Sbjct: 685 TPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITP--TTRPVTQPASQPATQPATT-PT 741
Query: 482 TTIIISTLQPSSVPIA 529
TTI +T S+V +A
Sbjct: 742 TTIPTTTQFSSAVSVA 757
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = +2
Query: 401 TITPADTSRPT----EVNTKPENDLSTLKP--TTTIIISTLQPSSVPIASGLEXVNSTVE 562
T T A ++PT T P T +P TTT +++TL +VP+ + + ++TV
Sbjct: 591 TQTTAPVTKPTVPSSTTQTAPPVTTPTSQPPVTTTSLLTTLTTPTVPVTTTVVPSSATVP 650
Query: 563 ERPLQLEAVLSST 601
P V ++T
Sbjct: 651 TTPPTTVTVAATT 663
Score = 28.3 bits (60), Expect = 5.0
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 305 TCTTMKCDRISCRNVTCNIYDTDITGXCXEYNTITPADTSRP-TEVNTKPENDLSTLKPT 481
T TT + T T T +TITP T+RP T+ ++P +T PT
Sbjct: 741 TPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITP--TTRPVTQPASQPATQPATT-PT 797
Query: 482 TTIIISTLQPSSVPIA 529
TTI +T S+V +A
Sbjct: 798 TTIPTTTQFSSAVSVA 813
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 5.0
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 305 TCTTMKCDRISCRNVTCNIYDTDITGXCXEYNTITPADTSRP-TEVNTKPENDLSTLKPT 481
T TT + T T T +TITP T+RP T+ ++P +T PT
Sbjct: 564 TPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITP--TTRPVTQPASQPATQPATT-PT 620
Query: 482 TTIIISTLQPSSVPIA 529
TTI +T S+V +A
Sbjct: 621 TTIPTTTQFSSAVSVA 636
>Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical
protein F23H12.5 protein.
Length = 802
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +2
Query: 392 EYNTITPADTSRPTEVNTKPENDLSTLKPTTTIIISTLQPSSVPI 526
E T TP+ ++ T T +T PTTT I T S PI
Sbjct: 201 EEPTSTPSTSTSTTTTTTTSTTTTTTEAPTTTTTIKTTTESIEPI 245
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 467 TLKPTTTIIISTLQPSS--VPIASGLEXVNST 556
T PTTT++ ST+ PS+ VP +S NST
Sbjct: 385 TPSPTTTLLTSTIAPSTQGVPTSSKSSSPNST 416
>AF016427-10|AAB65348.1| 301|Caenorhabditis elegans Hypothetical
protein F32D1.7 protein.
Length = 301
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 392 EYNTITPADTSRPTEVNTKPENDLSTLKPTTTIIISTLQPSSVPIASGLEXVN 550
E+ +D RP + +PE + +KP TT T P+++P++ LE ++
Sbjct: 57 EFRKRARSDEFRPAQ---QPEQSVVAVKPPTTSAPVTPFPANLPVSEQLEDLS 106
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/75 (26%), Positives = 29/75 (38%)
Frame = +2
Query: 392 EYNTITPADTSRPTEVNTKPENDLSTLKPTTTIIISTLQPSSVPIASGLEXVNSTVEERP 571
E T T +PT + + + +T TTT T S PIA+ ++T E P
Sbjct: 142 ETTTTFTTTTEKPTTIPSTTTSSTTTTTTTTTTEEPTTTTS--PIATTTTSTSTTTTETP 199
Query: 572 LQLEAVLSSTVMGTD 616
EA T+
Sbjct: 200 TTSEATTHEPTASTE 214
>Z81111-8|CAB03271.1| 238|Caenorhabditis elegans Hypothetical
protein Y75B12A.2 protein.
Length = 238
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 386 CXEYNTITPADTSRPTEVNTKPENDLSTLKPTTTIIIS 499
C E T T TS TE+ T L + P+TT II+
Sbjct: 121 CQEKTTSTTTTTSTKTEIQTTTTTVLISEVPSTTPIIN 158
>AL032662-1|CAA21758.1| 238|Caenorhabditis elegans Hypothetical
protein Y75B12A.2 protein.
Length = 238
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 386 CXEYNTITPADTSRPTEVNTKPENDLSTLKPTTTIIIS 499
C E T T TS TE+ T L + P+TT II+
Sbjct: 121 CQEKTTSTTTTTSTKTEIQTTTTTVLISEVPSTTPIIN 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,612,514
Number of Sequences: 27780
Number of extensions: 309486
Number of successful extensions: 1060
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -