Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_K11
(652 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g03500.1 68417.m00477 ankyrin repeat family protein contains ... 32 0.29
At3g50590.1 68416.m05533 transducin family protein / WD-40 repea... 31 0.50
At2g42980.1 68415.m05332 aspartyl protease family protein contai... 29 2.0
At2g17530.1 68415.m02028 protein kinase family protein identical... 29 3.5
At5g34940.2 68418.m04121 glycosyl hydrolase family 79 N-terminal... 28 6.2
At5g34940.1 68418.m04120 glycosyl hydrolase family 79 N-terminal... 28 6.2
At4g35500.2 68417.m05045 protein kinase family protein contains ... 28 6.2
At4g35500.1 68417.m05044 protein kinase family protein contains ... 28 6.2
At1g63170.1 68414.m07139 zinc finger (C3HC4-type RING finger) fa... 28 6.2
At1g75410.1 68414.m08760 BEL1-like homeodomain 3 protein (BLH3) ... 27 8.2
At1g22370.2 68414.m09509 UDP-glucoronosyl/UDP-glucosyl transfera... 27 8.2
At1g19700.1 68414.m02457 homeobox-leucine zipper family protein ... 27 8.2
>At4g03500.1 68417.m00477 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 652
Score = 32.3 bits (70), Expect = 0.29
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -2
Query: 498 DIIIVVVGFNVDRSFSGLVLTSVGLDVSAGVIVLYSXHXPVMSVS*I-LQVTFLQLIL 328
D+ I++ FN+ F GL LTS+ + AG V S H P++ + + + FL ++L
Sbjct: 549 DLSIILKAFNIALPFLGLALTSMSIAFMAGTYVAVS-HLPLLGYFVLGIGIIFLLVLL 605
>At3g50590.1 68416.m05533 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); some
similarity to s-tomosyn isoform (GI:4689231)[Rattus
norvegicus]; contains non-consensus AT-AC splice sites at
intron 18
Length = 1606
Score = 31.5 bits (68), Expect = 0.50
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 491 IISTLQPSSVPIASGLEXVNSTVEERPLQLEAVLSSTVMGTDNLGSKD 634
++ + S V GL + V ++PL L A SS++MG ++LG ++
Sbjct: 1061 VVEIKEDSLVSKPGGLSLLGKPVSDKPLALPAGESSSMMGLESLGKQN 1108
>At2g42980.1 68415.m05332 aspartyl protease family protein contains
pfam profile: PF00026 eukaryotic aspartyl protease
Length = 527
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3
Query: 155 STRSHDPETGHVQSSVCLDNRALSTSKRTPKSLLQIMLR 39
S++ HDP H + SV +R +KRT S++ + ++
Sbjct: 63 SSKEHDPSKEHTRESVKPQSRIKQETKRTTHSVVDLQIQ 101
>At2g17530.1 68415.m02028 protein kinase family protein identical to
SRPK2 [Arabidopsis thaliana] gi|9843645|emb|CAC03676;
contains protein kinase domain, Pfam:PF00069
Length = 440
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 464 STLKPTTTIIISTLQPSSVPIASGLEXV 547
S LKP ++ ST+ P+ PI SGL +
Sbjct: 168 SDLKPENILLCSTIDPAKDPIRSGLTPI 195
>At5g34940.2 68418.m04121 glycosyl hydrolase family 79 N-terminal
domain-containing protein similar to beta-glucuronidase
precursor [Scutellaria baicalensis] GI:8918740; contains
Pfam profile PF03662: Glycosyl hydrolase family 79,
N-terminal domain
Length = 536
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1
Query: 385 LSGNVGVINITGNVSATDSVAFHSCASLIIAPYCNVMFTDXYNVV 251
L+GN +N G++ + + +S + IAPY +++F NVV
Sbjct: 488 LNGNALQVNSMGDLPPIEPIHINSTEPITIAPY-SIVFVHMRNVV 531
>At5g34940.1 68418.m04120 glycosyl hydrolase family 79 N-terminal
domain-containing protein similar to beta-glucuronidase
precursor [Scutellaria baicalensis] GI:8918740; contains
Pfam profile PF03662: Glycosyl hydrolase family 79,
N-terminal domain
Length = 401
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1
Query: 385 LSGNVGVINITGNVSATDSVAFHSCASLIIAPYCNVMFTDXYNVV 251
L+GN +N G++ + + +S + IAPY +++F NVV
Sbjct: 353 LNGNALQVNSMGDLPPIEPIHINSTEPITIAPY-SIVFVHMRNVV 396
>At4g35500.2 68417.m05045 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 439
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 464 STLKPTTTIIISTLQPSSVPIASGL 538
S LKP ++ ST+ P+ P+ SGL
Sbjct: 169 SDLKPENILLCSTIDPAKDPVRSGL 193
>At4g35500.1 68417.m05044 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 438
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 464 STLKPTTTIIISTLQPSSVPIASGL 538
S LKP ++ ST+ P+ P+ SGL
Sbjct: 168 SDLKPENILLCSTIDPAKDPVRSGL 192
>At1g63170.1 68414.m07139 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q06003 Goliath
protein (G1 protein) {Drosophila melanogaster}; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 381
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 152 STIWGWITYPFTWWSSGEPELAPGSDQL 235
S IW W+ F W SSG ELA GS QL
Sbjct: 194 SFIW-WVI-GFYWVSSGGQELAQGSPQL 219
>At1g75410.1 68414.m08760 BEL1-like homeodomain 3 protein (BLH3)
identical to BEL1-like homeodomain 3 (GI:13877515)
[Arabidopsis thaliana]
Length = 524
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 537 LXKLIPRSKNDPYNWKLFYRLQLWEPII 620
L K SKN NW + R++LW+P+I
Sbjct: 382 LSKQTGLSKNQVANWFINARVRLWKPMI 409
>At1g22370.2 68414.m09509 UDP-glucoronosyl/UDP-glucosyl transferase
family protein glycosyltransferase family
Length = 479
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 449 PENDLSTLKPTTTIIISTLQPSSVPIASGLEXVNSTVEERPLQL---EAVLSSTVMGTDN 619
PE + ++ T+ ST++ P L +N+T + P+ + V+S T+ +
Sbjct: 79 PEENKDVMQDVPTLCESTMKNCLAPFKELLRRINTTKDVPPVSCIVSDGVMSFTLDAAEE 138
Query: 620 LGSKD 634
LG D
Sbjct: 139 LGVPD 143
>At1g19700.1 68414.m02457 homeobox-leucine zipper family protein
similar to BEL1-like homeodomain 1 (GI:13877517)
[Arabidopsis thaliana]; similar to homeodomain protein
GI:7239157 from (Malus domestica); contains weak hit to
Pfam profile PF00046: Homeobox domain
Length = 538
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 537 LXKLIPRSKNDPYNWKLFYRLQLWEPII 620
L K SKN NW + R++LW+P+I
Sbjct: 387 LAKQTGLSKNQVANWFINARVRLWKPMI 414
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,651,551
Number of Sequences: 28952
Number of extensions: 284787
Number of successful extensions: 786
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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