Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_K10
         (648 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0450 - 24443396-24443501,24443642-24443794,24446213-24446325     62   5e-10
01_07_0083 + 40970890-40971015,40971886-40971994,40972679-409727...    34   0.11 
08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635...    29   4.2  
02_02_0592 - 11934238-11934249,11934755-11934835,11935166-119353...    28   5.6  

>03_05_0450 - 24443396-24443501,24443642-24443794,24446213-24446325
          Length = 123

 Score = 61.7 bits (143), Expect = 5e-10
 Identities = 29/95 (30%), Positives = 54/95 (56%)
 Frame = +1

Query: 196 MVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDL 375
           +VD  D+  I + Q  +L R + +  +LT+ N+ S       S +F   T+LL  M+ DL
Sbjct: 22  LVDTGDIGAIRQTQHLILGRLQDSNAVLTHFNEYSEQCFAEVSNDFASKTRLLKSMKDDL 81

Query: 376 EFIFKKIRAIKTKLSSQYPXAYKEAVAESLANRKP 480
           + IF K+R++K++L++ YP A+ +       +++P
Sbjct: 82  DHIFLKLRSMKSRLAATYPDAFPDGAMAKTMDQRP 116


>01_07_0083 +
           40970890-40971015,40971886-40971994,40972679-40972790,
           40972944-40973100,40973609-40973761,40974143-40974292,
           40974803-40974999,40975446-40975473
          Length = 343

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -1

Query: 120 STVRHYLLFSYTIHYIYTQISLIFWSFIKTSKCV*CVECP 1
           S +  Y ++SYTIH      ++ FW FI+ S  + CV CP
Sbjct: 87  SPINVYAIYSYTIHCSTQAENICFW-FIQNSPYLICVICP 125


>08_02_1457 + 27260841-27260965,27261126-27261246,27263455-27263543,
            27263776-27263860,27263970-27264074,27264446-27264527,
            27264573-27264686,27265029-27265330,27265519-27266114,
            27266216-27266376,27266489-27266592,27266697-27266856,
            27266942-27267105,27267213-27267545,27267640-27267930,
            27268276-27268359,27268430-27268563,27268665-27268892,
            27268993-27269164,27269263-27269517,27269778-27270047
          Length = 1324

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -3

Query: 328  LWMQPLIYWPTADYNLSAFLLFFQISATYSFV 233
            LW Q   YW  +++N+  F+  F +S  +  V
Sbjct: 1054 LWKQNCAYWKNSEHNVVRFINTFAVSIMFGIV 1085


>02_02_0592 -
           11934238-11934249,11934755-11934835,11935166-11935324,
           11936362-11936442,11936523-11936591,11937147-11937260,
           11937805-11937858,11938788-11938915,11940527-11940782
          Length = 317

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/52 (21%), Positives = 27/52 (51%)
 Frame = +1

Query: 310 LRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKLSSQYPXAYKEAVAESL 465
           L++ +   ++++ L+  M  D+E +  K  + K   S  YP +  +A+ + +
Sbjct: 96  LKSKANNLEENSNLIGTMEHDIEILMNKYESTKKSQSKSYPESNVKALEDEV 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,930,947
Number of Sequences: 37544
Number of extensions: 254775
Number of successful extensions: 540
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)