Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_K10
         (648 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006479-1|AAH06479.1|  176|Homo sapiens chromosome 19 open read...    98   3e-20
BC001080-1|AAH01080.1|  176|Homo sapiens chromosome 19 open read...    98   3e-20
AC005253-1|AAC25583.1|  183|Homo sapiens R26445_1 protein.             98   3e-20
AL591502-3|CAI12581.1|  941|Homo sapiens gamma-aminobutyric acid...    32   1.5  
AL445495-1|CAD13322.2|  941|Homo sapiens gamma-aminobutyric acid...    32   1.5  
AL356282-1|CAH72233.1|  941|Homo sapiens gamma-aminobutyric acid...    32   1.5  
AL353782-5|CAH71298.1|  941|Homo sapiens gamma-aminobutyric acid...    32   1.5  
AJ012188-1|CAA09942.1|  941|Homo sapiens GABAB receptor, subunit...    32   1.5  
AF099033-1|AAD45867.1|  941|Homo sapiens gamma-aminobutyric acid...    32   1.5  
AF095784-1|AAD30389.1|  941|Homo sapiens GABA-B receptor R2 prot...    32   1.5  
AF074483-1|AAD03336.1|  941|Homo sapiens GABA-B receptor 2 protein.    32   1.5  
AF069755-1|AAC99345.1|  941|Homo sapiens orphan G protein-couple...    32   1.5  
AF056085-1|AAC63228.1|  941|Homo sapiens GABA-B receptor protein.      32   1.5  
BC035071-1|AAH35071.2|  883|Homo sapiens GABBR2 protein protein.       31   3.5  

>BC006479-1|AAH06479.1|  176|Homo sapiens chromosome 19 open reading
           frame 50 protein.
          Length = 176

 Score = 97.9 bits (233), Expect = 3e-20
 Identities = 48/94 (51%), Positives = 64/94 (68%)
 Frame = +1

Query: 160 TAPEVFVQGLXGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKK 339
           +A  VF   +  MV+  DV  II AQKNML RFEKT EML N N LS++RL+  S  F  
Sbjct: 6   SASRVFCGRILSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSARLQQMSERFLH 65

Query: 340 HTQLLFEMRKDLEFIFKKIRAIKTKLSSQYPXAY 441
           HT+ L EM++DL+ IF++IR +K KL+ Q+P A+
Sbjct: 66  HTRTLVEMKRDLDSIFRRIRTLKGKLARQHPEAF 99


>BC001080-1|AAH01080.1|  176|Homo sapiens chromosome 19 open reading
           frame 50 protein.
          Length = 176

 Score = 97.9 bits (233), Expect = 3e-20
 Identities = 48/94 (51%), Positives = 64/94 (68%)
 Frame = +1

Query: 160 TAPEVFVQGLXGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKK 339
           +A  VF   +  MV+  DV  II AQKNML RFEKT EML N N LS++RL+  S  F  
Sbjct: 6   SASRVFCGRILSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSARLQQMSERFLH 65

Query: 340 HTQLLFEMRKDLEFIFKKIRAIKTKLSSQYPXAY 441
           HT+ L EM++DL+ IF++IR +K KL+ Q+P A+
Sbjct: 66  HTRTLVEMKRDLDSIFRRIRTLKGKLARQHPEAF 99


>AC005253-1|AAC25583.1|  183|Homo sapiens R26445_1 protein.
          Length = 183

 Score = 97.9 bits (233), Expect = 3e-20
 Identities = 48/94 (51%), Positives = 64/94 (68%)
 Frame = +1

Query: 160 TAPEVFVQGLXGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKK 339
           +A  VF   +  MV+  DV  II AQKNML RFEKT EML N N LS++RL+  S  F  
Sbjct: 13  SASRVFCGRILSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSARLQQMSERFLH 72

Query: 340 HTQLLFEMRKDLEFIFKKIRAIKTKLSSQYPXAY 441
           HT+ L EM++DL+ IF++IR +K KL+ Q+P A+
Sbjct: 73  HTRTLVEMKRDLDSIFRRIRTLKGKLARQHPEAF 106


>AL591502-3|CAI12581.1|  941|Homo sapiens gamma-aminobutyric acid
           (GABA) B receptor, 2 protein.
          Length = 941

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = +1

Query: 238 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 417
           +N  +   KT+  +T+ NQ S SRL    +E  +    + E+ KDLE +  +++    K 
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823

Query: 418 SSQYPXAYKE 447
           +      Y+E
Sbjct: 824 TYIKQNHYQE 833


>AL445495-1|CAD13322.2|  941|Homo sapiens gamma-aminobutyric acid
           (GABA) B receptor, 2 protein.
          Length = 941

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = +1

Query: 238 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 417
           +N  +   KT+  +T+ NQ S SRL    +E  +    + E+ KDLE +  +++    K 
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823

Query: 418 SSQYPXAYKE 447
           +      Y+E
Sbjct: 824 TYIKQNHYQE 833


>AL356282-1|CAH72233.1|  941|Homo sapiens gamma-aminobutyric acid
           (GABA) B receptor, 2 protein.
          Length = 941

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = +1

Query: 238 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 417
           +N  +   KT+  +T+ NQ S SRL    +E  +    + E+ KDLE +  +++    K 
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823

Query: 418 SSQYPXAYKE 447
           +      Y+E
Sbjct: 824 TYIKQNHYQE 833


>AL353782-5|CAH71298.1|  941|Homo sapiens gamma-aminobutyric acid
           (GABA) B receptor, 2 protein.
          Length = 941

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = +1

Query: 238 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 417
           +N  +   KT+  +T+ NQ S SRL    +E  +    + E+ KDLE +  +++    K 
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823

Query: 418 SSQYPXAYKE 447
           +      Y+E
Sbjct: 824 TYIKQNHYQE 833


>AJ012188-1|CAA09942.1|  941|Homo sapiens GABAB receptor, subunit 2
           protein.
          Length = 941

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = +1

Query: 238 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 417
           +N  +   KT+  +T+ NQ S SRL    +E  +    + E+ KDLE +  +++    K 
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823

Query: 418 SSQYPXAYKE 447
           +      Y+E
Sbjct: 824 TYIKQNHYQE 833


>AF099033-1|AAD45867.1|  941|Homo sapiens gamma-aminobutyric acid
           type B receptor 2 protein.
          Length = 941

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = +1

Query: 238 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 417
           +N  +   KT+  +T+ NQ S SRL    +E  +    + E+ KDLE +  +++    K 
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823

Query: 418 SSQYPXAYKE 447
           +      Y+E
Sbjct: 824 TYIKQNHYQE 833


>AF095784-1|AAD30389.1|  941|Homo sapiens GABA-B receptor R2
           protein.
          Length = 941

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = +1

Query: 238 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 417
           +N  +   KT+  +T+ NQ S SRL    +E  +    + E+ KDLE +  +++    K 
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823

Query: 418 SSQYPXAYKE 447
           +      Y+E
Sbjct: 824 TYIKQNHYQE 833


>AF074483-1|AAD03336.1|  941|Homo sapiens GABA-B receptor 2 protein.
          Length = 941

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = +1

Query: 238 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 417
           +N  +   KT+  +T+ NQ S SRL    +E  +    + E+ KDLE +  +++    K 
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823

Query: 418 SSQYPXAYKE 447
           +      Y+E
Sbjct: 824 TYIKQNHYQE 833


>AF069755-1|AAC99345.1|  941|Homo sapiens orphan G protein-coupled
           receptor HG20 protein.
          Length = 941

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = +1

Query: 238 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 417
           +N  +   KT+  +T+ NQ S SRL    +E  +    + E+ KDLE +  +++    K 
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823

Query: 418 SSQYPXAYKE 447
           +      Y+E
Sbjct: 824 TYIKQNHYQE 833


>AF056085-1|AAC63228.1|  941|Homo sapiens GABA-B receptor protein.
          Length = 941

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = +1

Query: 238 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 417
           +N  +   KT+  +T+ NQ S SRL    +E  +    + E+ KDLE +  +++    K 
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823

Query: 418 SSQYPXAYKE 447
           +      Y+E
Sbjct: 824 TYIKQNHYQE 833


>BC035071-1|AAH35071.2|  883|Homo sapiens GABBR2 protein protein.
          Length = 883

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 19/70 (27%), Positives = 33/70 (47%)
 Frame = +1

Query: 238 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 417
           +N  +   KT+  +T+ NQ S SRL    +E       + E+ KDLE +  +++    K 
Sbjct: 706 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHHLRMKITELDKDLEEVTMQLQDTPEKT 765

Query: 418 SSQYPXAYKE 447
           +      Y+E
Sbjct: 766 TYIKQNHYQE 775


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,173,857
Number of Sequences: 237096
Number of extensions: 1532468
Number of successful extensions: 2700
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2698
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)