Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_K10
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97006-4|AAC47964.1| 140|Caenorhabditis elegans Hypothetical pr... 92 4e-19
Z92808-1|CAB07266.2| 606|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 8.7
U29244-12|AAC71093.3| 604|Caenorhabditis elegans Hypothetical p... 27 8.7
AF067946-1|AAC17686.3| 275|Caenorhabditis elegans Hypothetical ... 27 8.7
>U97006-4|AAC47964.1| 140|Caenorhabditis elegans Hypothetical
protein C13F10.2 protein.
Length = 140
Score = 91.9 bits (218), Expect = 4e-19
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Frame = +1
Query: 154 NYTAPEV--FVQGLXGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCNQLSASRLRAAST 327
++ PE + L +D+ ++ II Q+ L+RFEKT EML NC QL R+ A
Sbjct: 27 SFDMPETPHLIDSLTSQIDEFTIQSIIDTQRQSLKRFEKTNEMLMNCAQLGDRRIEKAKR 86
Query: 328 EFKKHTQLLFEMRKDLEFIFKKIRAIKTKLSSQYPXAYKEAVAESLANR 474
+ H + + +M+ DLEFIFKKIR KT LSS+YP Y E AE R
Sbjct: 87 DSVGHKETILQMKTDLEFIFKKIRMFKTVLSSKYPEVYAEVSAELTPKR 135
>Z92808-1|CAB07266.2| 606|Caenorhabditis elegans Hypothetical
protein M04C3.2 protein.
Length = 606
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 205 QTDVEVIIRAQKNMLQRFEKTTEMLTNCNQLS 300
+ D I++A KN+++ FEK E++ Q S
Sbjct: 554 EQDRSFIVKAMKNIIENFEKAIEIIEKATQTS 585
>Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/102 (21%), Positives = 45/102 (44%)
Frame = +1
Query: 226 IRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAI 405
I +++N+++ E T + L + + L+ TEF + + E K E F + AI
Sbjct: 696 INSERNLIK--ENTEKFLNLFTTRTNNELQQIKTEFDETMKNYKERVKTFERDFNESEAI 753
Query: 406 KTKLSSQYPXAYKEAVAESLANRKPLVXDEXLKPSXEKPESK 531
K + S Y++ + ++ D+ ++ S + E K
Sbjct: 754 KQRTISNLKGLYEDESTHQKRKYETMIEDQ-IRKSFRQLEEK 794
>Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/102 (21%), Positives = 45/102 (44%)
Frame = +1
Query: 226 IRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAI 405
I +++N+++ E T + L + + L+ TEF + + E K E F + AI
Sbjct: 696 INSERNLIK--ENTEKFLNLFTTRTNNELQQIKTEFDETMKNYKERVKTFERDFNESEAI 753
Query: 406 KTKLSSQYPXAYKEAVAESLANRKPLVXDEXLKPSXEKPESK 531
K + S Y++ + ++ D+ ++ S + E K
Sbjct: 754 KQRTISNLKGLYEDESTHQKRKYETMIEDQ-IRKSFRQLEEK 794
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 172 VFVQGLXGMVDQTDV-EVIIRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQ 348
+F G+ + TDV E R QK + + F+KTTE L ++ ++ +++ K+H
Sbjct: 1661 IFASGIATREENTDVLEEEERIQKRV-EEFKKTTENLEIQKEVVLTKEEVDNSDVKEHRT 1719
Query: 349 LLFEMRKDLEFI 384
+ D FI
Sbjct: 1720 SAVNIDLDDVFI 1731
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 172 VFVQGLXGMVDQTDV-EVIIRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQ 348
+F G+ + TDV E R QK + + F+KTTE L ++ ++ +++ K+H
Sbjct: 1661 IFASGIATREENTDVLEEEERIQKRV-EEFKKTTENLEIQKEVVLTKEEVDNSDVKEHRT 1719
Query: 349 LLFEMRKDLEFI 384
+ D FI
Sbjct: 1720 SAVNIDLDDVFI 1731
>U29244-12|AAC71093.3| 604|Caenorhabditis elegans Hypothetical
protein ZK1248.13 protein.
Length = 604
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -1
Query: 258 KSLQHILLCSNNHFNVSLIHHTG*ALNKNFGRSVVLEAFYREITFWSTVRHYL-LFSYTI 82
K L + C + +VSL HH A+ K R++ + + T V H+ LFS +
Sbjct: 431 KELLSRMKCPQSTIDVSLAHHKTNAIEK-MNRALRTKLRFFVFTLEQVVSHFRELFSDKV 489
Query: 81 HYIY 70
Y++
Sbjct: 490 RYVF 493
>AF067946-1|AAC17686.3| 275|Caenorhabditis elegans Hypothetical
protein W02G9.5 protein.
Length = 275
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/19 (68%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = +3
Query: 48 KISTKF-VYKYNVLCTKTI 101
KIS+KF + YNVLC KTI
Sbjct: 66 KISSKFTICSYNVLCQKTI 84
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,023,548
Number of Sequences: 27780
Number of extensions: 264943
Number of successful extensions: 694
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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