Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_K05
(593 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0319 - 16712572-16712654,16712756-16712797,16713955-167142... 168 3e-42
03_01_0276 + 2124538-2124550,2124678-2124962,2126813-2126854,212... 168 3e-42
02_05_1201 + 34929577-34929589,34930252-34930587,34931378-349314... 161 5e-40
12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845 49 3e-06
08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767 31 0.92
01_06_0063 + 26100877-26101144,26101683-26101990,26102133-261028... 31 0.92
10_05_0003 - 7715935-7716336,7716360-7716890 30 1.2
05_07_0365 - 29662703-29662710,29664321-29664378,29664675-296647... 30 1.6
03_06_0296 + 32901696-32901892,32901989-32902232,32903992-329041... 29 2.1
01_01_0098 + 744582-745380,746107-746130,746500-747569 29 2.8
06_03_0025 - 15577231-15577420,15577682-15577813,15578025-155781... 28 6.5
02_04_0290 - 21627733-21628353,21628424-21628663,21628874-216292... 27 8.5
02_02_0500 - 10993675-10994067,10994434-10995738 27 8.5
>10_08_0319 -
16712572-16712654,16712756-16712797,16713955-16714239,
16714346-16714358
Length = 140
Score = 168 bits (409), Expect = 3e-42
Identities = 83/120 (69%), Positives = 100/120 (83%)
Frame = +2
Query: 38 MSKRGRGGSAGAKFRISLGLPAGSSNQLRRQHRAQRICM*SLSKVIKGRLNRLPAAGSGD 217
MSKRGRGGSAG KFR+SLGLP ++ A+ + + S+ K IKGRLNRLP+A GD
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISV-KGIKGRLNRLPSACVGD 59
Query: 218 MIVATVKKGKPELRKKVMPAVVIRQRKPFRXRDGVFIYFEDNAGVIVNNKGEMKGSAITG 397
M++ATVKKGKP+LRKKVMPAV++RQRKP+R +DGV++YFEDNAGVIVN KGEMKGSAITG
Sbjct: 60 MVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITG 119
Score = 33.1 bits (72), Expect = 0.17
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3
Query: 396 GPVAKECADLWPR 434
GP+ KECADLWPR
Sbjct: 119 GPIGKECADLWPR 131
>03_01_0276 +
2124538-2124550,2124678-2124962,2126813-2126854,
2126943-2127025
Length = 140
Score = 168 bits (409), Expect = 3e-42
Identities = 83/120 (69%), Positives = 100/120 (83%)
Frame = +2
Query: 38 MSKRGRGGSAGAKFRISLGLPAGSSNQLRRQHRAQRICM*SLSKVIKGRLNRLPAAGSGD 217
MSKRGRGGSAG KFR+SLGLP ++ A+ + + S+ K IKGRLNRLP+A GD
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISV-KGIKGRLNRLPSACVGD 59
Query: 218 MIVATVKKGKPELRKKVMPAVVIRQRKPFRXRDGVFIYFEDNAGVIVNNKGEMKGSAITG 397
M++ATVKKGKP+LRKKVMPAV++RQRKP+R +DGV++YFEDNAGVIVN KGEMKGSAITG
Sbjct: 60 MVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITG 119
Score = 33.1 bits (72), Expect = 0.17
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3
Query: 396 GPVAKECADLWPR 434
GP+ KECADLWPR
Sbjct: 119 GPIGKECADLWPR 131
>02_05_1201 +
34929577-34929589,34930252-34930587,34931378-34931419,
34931630-34931712
Length = 157
Score = 161 bits (390), Expect = 5e-40
Identities = 79/116 (68%), Positives = 96/116 (82%)
Frame = +2
Query: 50 GRGGSAGAKFRISLGLPAGSSNQLRRQHRAQRICM*SLSKVIKGRLNRLPAAGSGDMIVA 229
GRGGSAG KFR+SLGLP ++ A+ + + S+ K IKGRLNRLP+A GDM++A
Sbjct: 22 GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISV-KGIKGRLNRLPSACVGDMVMA 80
Query: 230 TVKKGKPELRKKVMPAVVIRQRKPFRXRDGVFIYFEDNAGVIVNNKGEMKGSAITG 397
TVKKGKP+LRKKVMPAV++RQRKP+R +DGV++YFEDNAGVIVN KGEMKGSAITG
Sbjct: 81 TVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITG 136
Score = 33.1 bits (72), Expect = 0.17
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3
Query: 396 GPVAKECADLWPR 434
GP+ KECADLWPR
Sbjct: 136 GPIGKECADLWPR 148
>12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845
Length = 170
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Frame = +2
Query: 212 GDMIVATVKKGKPELRKK---VMPAVVIRQRKPFRXRDGVFIYFEDNAGVIVNNKGEMKG 382
GD I+ +VK+ +P + K V+ VV+R DG I F+DNA V+VNNKGE+ G
Sbjct: 84 GDTIIGSVKEAQPRGKVKKGDVVYGVVVRAAMKRGRNDGSEIQFDDNAIVLVNNKGELIG 143
Query: 383 SAITG 397
+ + G
Sbjct: 144 TRVFG 148
>08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767
Length = 1041
Score = 30.7 bits (66), Expect = 0.92
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 64 RGSEIPYLPGSPSWEQ*STAPTTQGAKN 147
RG+ +P L +PSWE+ S APT + K+
Sbjct: 569 RGAAVPTLKMNPSWEKPSVAPTLELRKS 596
>01_06_0063 +
26100877-26101144,26101683-26101990,26102133-26102849,
26103338-26103466,26103594-26103698,26103732-26103797,
26104102-26104302,26104437-26104562
Length = 639
Score = 30.7 bits (66), Expect = 0.92
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -3
Query: 492 NAATNLKRIFKR*SSRLRQYAATDQHILWLQAPVMAEPFISPLLLTMTPALS 337
+A+TN +R+ R S QY T L AP++ EP SP L TP LS
Sbjct: 299 SASTNTRRLLNR--SFSHQYHQTS-----LYAPLLVEPVTSPTLSDDTPVLS 343
>10_05_0003 - 7715935-7716336,7716360-7716890
Length = 310
Score = 30.3 bits (65), Expect = 1.2
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = +2
Query: 47 RGRGGSAGAKFRISLGLPA---GSSNQLRRQHRAQRICM*SLSKVIKGRLNRL-PAAGSG 214
R RGG G++ + +LGL A SS Q R +L + GR +L +A
Sbjct: 93 RPRGGGGGSRIKNALGLKARRLSSSAVAATQPMMVRTLSQTLGPALPGRGRQLMTSAEIM 152
Query: 215 DMIVATVKKGKPELRKKVMPAVVIRQRKPFRXRDG 319
+ ++ LR+ +M A+V Q KP DG
Sbjct: 153 RQQIRVTEQNNARLRRTLMRAIV-GQLKPVEFPDG 186
>05_07_0365 -
29662703-29662710,29664321-29664378,29664675-29664732,
29665029-29665086,29665737-29665794,29666091-29666134,
29666445-29666502,29666799-29666981,29667154-29667211,
29667508-29667565,29667862-29667919,29668216-29668259,
29668570-29668627,29668924-29669106,29669279-29669336,
29669633-29669676,29669987-29670044,29670341-29670398,
29670696-29670753,29671050-29671052
Length = 420
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 93 PREIRNFA-PAEPPRPLLDILLYQNFERNNR 4
P +IR FA P P+L IL Y F RNNR
Sbjct: 383 PSDIRCFAEPTAASWPMLWILRYSTFRRNNR 413
>03_06_0296 +
32901696-32901892,32901989-32902232,32903992-32904112,
32904219-32904406
Length = 249
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -2
Query: 352 DTRIVLKVYKYSITXSERFPLPDDHCRHYLFPEFRFTLFDCGHNHV 215
+ I+++ Y+ T +R P P D + +F F L+DC +N V
Sbjct: 101 EINIIIEAYR---TLRDRGPYPADQVVRDINGKFAFVLYDCSNNSV 143
>01_01_0098 + 744582-745380,746107-746130,746500-747569
Length = 630
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 227 PQSCPRNRPPAVCSGDL**PWTAITYRFFAPCVVGAVDY 111
P SC + +CSG T + + F PC V A+DY
Sbjct: 60 PSSCGSSHAKLICSGQD----TILHHPFLGPCKVTAIDY 94
>06_03_0025 -
15577231-15577420,15577682-15577813,15578025-15578173,
15579012-15579071,15593208-15593297,15593604-15593871,
15594517-15594608,15595355-15595441,15597333-15597440,
15597709-15597822,15598253-15598420,15599442-15599579,
15599699-15599908,15600986-15601237,15601965-15602111,
15603327-15603443
Length = 773
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 307 SERFPLPDDHCRHYLFPEFRFTLFDCGHNHVPGTGRRQS 191
S R PLP+D C Y+ ++R + H+ G R S
Sbjct: 25 SSRVPLPEDTCDSYVEQKYRCYIRTLKGCHISGRNRLDS 63
>02_04_0290 -
21627733-21628353,21628424-21628663,21628874-21629214,
21630934-21631612,21631893-21631962,21632063-21632190
Length = 692
Score = 27.5 bits (58), Expect = 8.5
Identities = 24/98 (24%), Positives = 38/98 (38%)
Frame = +3
Query: 15 FQNFDTTKCLREDVVVPRERNSVSPWVSQLGAVINCADNTGRKESVCDRCPRLSKVA*TD 194
F ++ R+ + V + ++SPW L V C+++ K C PR + A T
Sbjct: 159 FLSYVVLSSWRDSIAVLKSCEALSPWAENLQIVRRCSESIAWK--ACAN-PRGVRWAYTG 215
Query: 195 CRRPVPGT*LWPQSKRVNLNSGKR*CRQWSSGSGNRSE 308
G P + R SG +W+ G G E
Sbjct: 216 AGAGSGGARGGPAAIRGGGGSGGTASPRWNVGGGGGGE 253
>02_02_0500 - 10993675-10994067,10994434-10995738
Length = 565
Score = 27.5 bits (58), Expect = 8.5
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -3
Query: 396 PVMAEPFISPLLLTMTPALSSKYINTPSRXLNGFRCLMTT---AGITFFR-SSGLPFLTV 229
P EP I+ + ++PA+ +T S NG+ +M+T G+ F + SSG + V
Sbjct: 225 PAPVEPIIANGKVKLSPAVMEMIYSTISGIENGYLPVMSTEGSGGVYFMKDSSGESNVAV 284
Query: 228 ATIMSPEPAA 199
+ EP A
Sbjct: 285 FKPIDEEPMA 294
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,085,171
Number of Sequences: 37544
Number of extensions: 358956
Number of successful extensions: 1064
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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