Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_K02
(639 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 134 1e-32
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 87 3e-18
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 76 5e-15
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 74 2e-14
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 67 2e-12
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 65 9e-12
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 56 6e-09
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 54 1e-08
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 37 0.002
SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|... 28 0.99
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 25 7.0
SPAC1002.11 |gaa1||GPI-anchor transamidase complex subunit Gaa1 ... 25 7.0
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 25 9.2
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 134 bits (324), Expect = 1e-32
Identities = 60/93 (64%), Positives = 78/93 (83%)
Frame = +2
Query: 131 DEYGRPFIILRDQDXQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVT 310
D+ G PFI++RDQ+ ++RL G DA+KSHI A + +A+ +RTSLGPRGLDK+++S DG++T
Sbjct: 12 DDQGNPFILVRDQEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEIT 71
Query: 311 VTNDGATILKMMDVEHQIGKLLVQLAXSQXDEI 409
VTNDGATIL M+VEHQI KLLVQL+ SQ DEI
Sbjct: 72 VTNDGATILDQMEVEHQIAKLLVQLSKSQDDEI 104
Score = 90.6 bits (215), Expect = 2e-19
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +3
Query: 426 GVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTXENLIK 605
GVVVLAGALLEQA L+DKGIHPIRIADGYE A +A+ HLD++S+ + NL +
Sbjct: 110 GVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAISDVVDFSPENTTNLFR 169
Query: 606 VAMTTLGSKVV 638
A T+LGSKVV
Sbjct: 170 SAKTSLGSKVV 180
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 86.6 bits (205), Expect = 3e-18
Identities = 39/77 (50%), Positives = 56/77 (72%)
Frame = +2
Query: 179 KRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEH 358
++++G D ++ A IA+ +++SLGP GLDK++V GDVTVTNDGATIL ++DVEH
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74
Query: 359 QIGKLLVQLAXSQXDEI 409
GK+LV+LA Q E+
Sbjct: 75 PAGKVLVELAQQQDKEV 91
Score = 45.2 bits (102), Expect = 8e-06
Identities = 25/70 (35%), Positives = 39/70 (55%)
Frame = +3
Query: 429 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTXENLIKV 608
VV++A LL +A+ L+ IHP I GY +A A+ + V V+ E+LI V
Sbjct: 98 VVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSC-SVDSLGKESLINV 156
Query: 609 AMTTLGSKVV 638
A T++ SK++
Sbjct: 157 AKTSMSSKII 166
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 75.8 bits (178), Expect = 5e-15
Identities = 36/88 (40%), Positives = 55/88 (62%)
Frame = +2
Query: 146 PFIILRDQDXQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDG 325
P I+L++ + G + S+I A + T+RT+LGP G DKLMV G+V ++NDG
Sbjct: 9 PVIVLKEGTDDSQ--GRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66
Query: 326 ATILKMMDVEHQIGKLLVQLAXSQXDEI 409
ATI+K++D+ H K LV +A +Q E+
Sbjct: 67 ATIMKLLDIVHPAAKTLVDIARAQDAEV 94
Score = 36.3 bits (80), Expect = 0.004
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 429 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNK--NTXENLI 602
VVV AG LL +A ++ G+ I GY AA LA+ + ++ ++ + L
Sbjct: 101 VVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLT 160
Query: 603 KVAMTTLGSKVV 638
K A T + SK++
Sbjct: 161 KCASTAMNSKLI 172
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 74.1 bits (174), Expect = 2e-14
Identities = 34/66 (51%), Positives = 48/66 (72%)
Frame = +2
Query: 209 SHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLA 388
S+I AAR +A +RTSLGP+G+DK++ + G+V +TNDGATILK + V H K+LV L+
Sbjct: 23 SNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLVDLS 82
Query: 389 XSQXDE 406
+Q E
Sbjct: 83 AAQDVE 88
Score = 52.0 bits (119), Expect = 7e-08
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +3
Query: 429 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSE-AFPVNKNTXENLIK 605
VV+LAG++L A LL KGIHP IA+ ++ AA +D + E A + + E+L++
Sbjct: 96 VVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFT---VDCMKENALAIELSDRESLLR 152
Query: 606 VAMTTLGSKVV 638
A T+L SK+V
Sbjct: 153 AATTSLNSKIV 163
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 66.9 bits (156), Expect = 2e-12
Identities = 31/76 (40%), Positives = 49/76 (64%)
Frame = +2
Query: 182 RLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQ 361
R G A S+IQAA+ +A +RT LGPR + K+++ G V +TNDG IL+ ++V H
Sbjct: 14 RQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHP 73
Query: 362 IGKLLVQLAXSQXDEI 409
K +++LA +Q +E+
Sbjct: 74 AAKSMIELARTQDEEV 89
Score = 48.4 bits (110), Expect = 9e-07
Identities = 24/70 (34%), Positives = 43/70 (61%)
Frame = +3
Query: 429 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTXENLIKV 608
V++LAG +L AS LLD+ IHP+ + ++ A AL+ +D ++ PVN + + ++
Sbjct: 96 VIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEIT--LPVNVDDNAEMFRL 153
Query: 609 AMTTLGSKVV 638
T +G+K+V
Sbjct: 154 IRTCIGTKLV 163
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 64.9 bits (151), Expect = 9e-12
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +2
Query: 146 PFIILRDQDXQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVS-SDGDVTVTND 322
P I + Q+R G +A S A + ++++LGP+G+DK++ S S GD+ VTND
Sbjct: 5 PHQIFNESGIQER--GENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTND 62
Query: 323 GATILKMMDVEHQIGKLLVQLAXSQXDEI 409
GATILK + +++ K+LV ++ Q DE+
Sbjct: 63 GATILKSIALDNAAAKVLVNISKVQDDEV 91
Score = 37.9 bits (84), Expect = 0.001
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 429 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHL--DSVSEAFPVNKNTXENLI 602
V V A LL QA +++ IHP I DGY +A A+ L S+ + K +L
Sbjct: 98 VCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDALRASSIDNSSDPAK-FRSDLE 156
Query: 603 KVAMTTLGSKVV 638
+A TTL SK++
Sbjct: 157 NIARTTLSSKIL 168
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 55.6 bits (128), Expect = 6e-09
Identities = 26/71 (36%), Positives = 43/71 (60%)
Frame = +2
Query: 197 DAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLL 376
DA+ + A R+++ RTSLGP G +K++V+ +TND ATI++ ++V H KL+
Sbjct: 26 DAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLV 85
Query: 377 VQLAXSQXDEI 409
V Q +E+
Sbjct: 86 VDATQQQENEL 96
Score = 45.2 bits (102), Expect = 8e-06
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +3
Query: 429 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTXENLIKV 608
VVV G LL +A N++ G+ P+ IA GYEMA + + L+ + + + LIK
Sbjct: 103 VVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICADKIETVESEKELIKA 162
Query: 609 AMTTLGSK 632
T + SK
Sbjct: 163 IRTCISSK 170
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 54.4 bits (125), Expect = 1e-08
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +3
Query: 429 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTXENLIKV 608
V +L G LL+QA + +G+HP I+DG+ +A ALT LDS F V++ N+ K
Sbjct: 93 VCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFKTDFEVDREVLLNVAKT 152
Query: 609 AMTT-LGSKVV 638
+++T + SKVV
Sbjct: 153 SLSTKISSKVV 163
Score = 45.6 bits (103), Expect = 6e-06
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 200 AIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLLV 379
A++ +I AA + L+++LGP G K++V G + +T DG +L M +++ +
Sbjct: 17 ALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIA 76
Query: 380 QLAXSQXD 403
+ A +Q D
Sbjct: 77 KAATAQDD 84
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 37.1 bits (82), Expect = 0.002
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 191 GTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATI---LKMMDVEHQ 361
G DA S + +A + +LGP+G + L+ G +T DG T+ + + D
Sbjct: 40 GVDARASLLTGVDTLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFEN 99
Query: 362 IGKLLVQLAXSQXDEI 409
+G LVQ S+ +E+
Sbjct: 100 LGARLVQDVASKTNEV 115
>SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 405
Score = 28.3 bits (60), Expect = 0.99
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLL 376
L GLD MVS DGDVT+ DG +L V ++ +LL
Sbjct: 136 LADNGLD--MVSFDGDVTLYEDGQPLLPDNPVISRLIQLL 173
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 25.4 bits (53), Expect = 7.0
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 579 KNTXENLIKVAMTTLGS 629
+NT N++KV +TTLG+
Sbjct: 1008 RNTIRNIVKVFLTTLGA 1024
>SPAC1002.11 |gaa1||GPI-anchor transamidase complex subunit Gaa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 581
Score = 25.4 bits (53), Expect = 7.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 7 KIXTFLFLYLRRTEILNLFSSFV 75
KI F+FLYL T I +FS+F+
Sbjct: 427 KITVFIFLYLMLTFIGIIFSTFM 449
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 25.0 bits (52), Expect = 9.2
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = -1
Query: 357 CSTSIIFRIVAPSFVTVTSPSDD--TISLSRP-RGPR--DVRRVLAICRAACICDFMASV 193
CST++ + I P TV S+D T S+S GP D V AI +C+F++
Sbjct: 252 CSTNVDYTIPEPILKTVKFSSEDEYTGSVSLAWNGPSALDAYTVFAI---ETLCEFLSES 308
Query: 192 PVSLF 178
VS F
Sbjct: 309 AVSPF 313
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,543,088
Number of Sequences: 5004
Number of extensions: 49602
Number of successful extensions: 137
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 285732116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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