Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_J24
(649 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria gla... 61 3e-08
UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster subgro... 47 5e-04
UniRef50_Q9U4W1 Cluster: Pol-like protein; n=1; Aedes aegypti|Re... 46 0.001
UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila melanogast... 46 0.001
UniRef50_UPI00015B43F6 Cluster: PREDICTED: similar to pol-like p... 45 0.001
UniRef50_Q9TYX8 Cluster: Putative uncharacterized protein R11E3.... 42 0.013
UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like p... 40 0.052
UniRef50_Q868S4 Cluster: Reverse transcriptase; n=1; Anopheles g... 39 0.091
UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Re... 36 0.84
UniRef50_O18558 Cluster: Lian-Aa1 retrotransposon protein; n=1; ... 36 0.84
UniRef50_Q89W15 Cluster: Bll0878 protein; n=1; Bradyrhizobium ja... 35 2.0
UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles g... 35 2.0
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 35 2.0
UniRef50_Q868R8 Cluster: Reverse transcriptase; n=1; Anopheles g... 33 4.5
UniRef50_Q9Q919 Cluster: Gp052L; n=2; Leporipoxvirus|Rep: Gp052L... 33 7.9
UniRef50_Q9Y027 Cluster: Reverse transcriptase; n=3; Trypanosoma... 33 7.9
UniRef50_Q5EFG6 Cluster: Reverse transcriptase; n=2; Bothriurus ... 33 7.9
>UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria
glabrata|Rep: Pol-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 1222
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/76 (38%), Positives = 39/76 (51%)
Frame = -3
Query: 497 NCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAVDLSICTPDLAX 318
N H+ M+G TDT G L +I +LC+LN SPT + +DL++C P L
Sbjct: 133 NAHNTMWGSNNTDTRGRMLEDIFLQHDLCILNDASPTYLHPGTGSFTCIDLTVCVPGLLD 192
Query: 317 XHXWYTSSXTFGSDHF 270
W S+ GSDHF
Sbjct: 193 DFKWSVSNDLRGSDHF 208
Score = 33.5 bits (73), Expect = 4.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -3
Query: 155 NDVASYRXIALSSVLTKVAEHLVKNRLEWF 66
+D A+YR IAL+S + K E ++ +RL W+
Sbjct: 498 SDPANYRPIALTSCICKTMERMINSRLVWY 527
>UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster
subgroup|Rep: Putative ORF2 - Drosophila melanogaster
(Fruit fly)
Length = 1219
Score = 46.8 bits (106), Expect = 5e-04
Identities = 27/76 (35%), Positives = 38/76 (50%)
Frame = -3
Query: 497 NCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAVDLSICTPDLAX 318
N H +G TT+ G +D +L LLN SPT + N + +DL++C+P LA
Sbjct: 133 NGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPTHFSTHNTY-THIDLTLCSPILAP 191
Query: 317 XHXWYTSSXTFGSDHF 270
W + GSDHF
Sbjct: 192 HAKWKILNDLHGSDHF 207
>UniRef50_Q9U4W1 Cluster: Pol-like protein; n=1; Aedes aegypti|Rep:
Pol-like protein - Aedes aegypti (Yellowfever mosquito)
Length = 1208
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = -3
Query: 497 NCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAVDLSICTPDLAX 318
N HH +G + + G ++++ + +L +LN G+ T ++ SA+D+S+C+P +
Sbjct: 140 NGHHPEWGSVSPNDRGSLIMDVAEKLDLVILNDGATTFTR--GQRNSAIDVSLCSPSIVN 197
Query: 317 XHXWYTSSXTFGSDH 273
W GSDH
Sbjct: 198 RLLWTAKEDPMGSDH 212
>UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila
melanogaster|Rep: Pol protein - Drosophila melanogaster
(Fruit fly)
Length = 1227
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = -3
Query: 497 NCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAVDLSICTPDLAX 318
N ++G T+T G + ++ +L +LN GSPT + N + +D+S+ +P +A
Sbjct: 137 NSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPTHLSTHNTF-THIDISLISPQIAH 195
Query: 317 XHXWYTSSXTFGSDHF 270
W S GSDHF
Sbjct: 196 MCSWSISDNLHGSDHF 211
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 155 NDVASYRXIALSSVLTKVAEHLVKNRLEWF 66
+D+ SYR I+L S L K E ++ RL WF
Sbjct: 508 SDINSYRPISLLSCLGKTLEKIIAQRLTWF 537
>UniRef50_UPI00015B43F6 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 963
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = -3
Query: 497 NCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRT---KPNEKPSAVDLSICTPD 327
N HH M+ G D G H+ + NL +LN P R T KP KP + D+S + +
Sbjct: 142 NAHHSMWSVGKEDHIGKHIASEITHTNLVILN--DPFRATLIPKPQNKPGSPDISAISLN 199
Query: 326 LAXXHXWYTSSXTFGSDH 273
L W G DH
Sbjct: 200 LIHKTEWSLLGDALGGDH 217
Score = 33.1 bits (72), Expect = 6.0
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -3
Query: 140 YRXIALSSVLTKVAEHLVKNRLEWF 66
YR IAL+S L K+ E ++K RL+W+
Sbjct: 497 YRPIALASSLLKLLEKIIKKRLDWY 521
>UniRef50_Q9TYX8 Cluster: Putative uncharacterized protein R11E3.3;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein R11E3.3 - Caenorhabditis elegans
Length = 931
Score = 41.9 bits (94), Expect = 0.013
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = -3
Query: 497 NCHHQMFGC-GTTDTNGVHLVEILDLQ-NLCLLNTGSPTRRTKPNEKPSAVDLSICTPDL 324
N HH + G+ DT G L E++DL +L + N TR S+ D++ICT DL
Sbjct: 41 NAHHSAWHSEGSEDTRGRELAELIDLHPDLIIQNEQVHTRAD--TYSISSPDITICTADL 98
Query: 323 AXXHXWYTSSXTFGSDH 273
A W T GSDH
Sbjct: 99 ATKCHWST-LYKLGSDH 114
>UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 1119
Score = 39.9 bits (89), Expect = 0.052
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -3
Query: 497 NCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNE--KPSAVDLSICTPDL 324
N HH ++G NG +VE LD N LLN SPT N S +DL+ +P L
Sbjct: 129 NAHHSVWGSSKECCNGKVIVENLDQGNFILLNNQSPTHVKISNSGCSYSNIDLTFVSPGL 188
Query: 323 A 321
A
Sbjct: 189 A 189
>UniRef50_Q868S4 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 973
Score = 39.1 bits (87), Expect = 0.091
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = -3
Query: 479 FGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAVDLSICTPDLAXXHXWYT 300
+G +T+ G ++E NL L+N G + N + S +DL+ C+P LA W
Sbjct: 128 WGSKSTNARGNAVLEHFSRLNLVLVNVGFCPTFVR-NSRTSIIDLTFCSPALASSMNWRV 186
Query: 299 SSXTFGSDH 273
S+ SDH
Sbjct: 187 SNAYTLSDH 195
>UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Rep:
Pol protein - Drosophila melanogaster (Fruit fly)
Length = 1092
Score = 35.9 bits (79), Expect = 0.84
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = -3
Query: 497 NCHHQMFGCGTTDTNGVHLVEILDLQNLC-LLNTGSPTRRTKPNEK-PSAVDLSICTPDL 324
N H+ +GC G L + + ++ ++ TGS T K PSA+D SIC L
Sbjct: 167 NAKHRQWGCIRACQRGAALYDAIQADSMAEIVATGSATHFPHDTRKSPSAIDFSIC-KRL 225
Query: 323 AXXHXWYTSSXTFGSDH 273
+SS SDH
Sbjct: 226 GRYEKRISSSAHLSSDH 242
>UniRef50_O18558 Cluster: Lian-Aa1 retrotransposon protein; n=1;
Aedes aegypti|Rep: Lian-Aa1 retrotransposon protein -
Aedes aegypti (Yellowfever mosquito)
Length = 1189
Score = 35.9 bits (79), Expect = 0.84
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = -3
Query: 497 NCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGS-PTRRTKPNEKPSAVDLSICTPDLA 321
N HH ++G + G L+E L +L LLN G+ PT E+ +D+++C+ ++
Sbjct: 124 NAHHIIWGSSDINLRGSSLMEYLSSTDLGLLNIGNRPTFMVSNREE--VLDITLCSNRIS 181
Query: 320 -XXHXWYTSSXTFGSDH 273
W+ S SDH
Sbjct: 182 HELTNWHVSDEESLSDH 198
>UniRef50_Q89W15 Cluster: Bll0878 protein; n=1; Bradyrhizobium
japonicum|Rep: Bll0878 protein - Bradyrhizobium
japonicum
Length = 109
Score = 34.7 bits (76), Expect = 2.0
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +1
Query: 364 FSLGFVRLVGEPVLSKHKFCKSNISTKCTPLVSVVPQPNI 483
F L F R+VGEP L+ H+ + I+ T L ++V +PN+
Sbjct: 7 FELWFCRIVGEPRLAGHEMLQPTIAHTPTGLAAMVLRPNV 46
>UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1173
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = -3
Query: 497 NCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRT-KPNEKPSAVDLSICTPDLA 321
N H+ +G T G L+ ++ L +LN G+ + T + S +D++ +P +
Sbjct: 123 NAWHEAWGSARTKRKGEELLNTVEQLGLIVLNRGNTSTFTGRGIAGESVIDVTFASPSIV 182
Query: 320 XXHXWYTSSXTFGSDH 273
+ W + SDH
Sbjct: 183 RYNTWEVLKSYWYSDH 198
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 497 NCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRT-KPNEKPSAVDLSI 339
N H ++G G L E L + +L TGSPTR P+ PS +D ++
Sbjct: 140 NARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTRYPYVPSHTPSCIDFAV 193
>UniRef50_Q868R8 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 988
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 416 LCLLNTGSPTRRTKPNEKPSAVDLSICTPDLAXXHXWYTSSXTFGSDH 273
L LLN G+ + N + S VD+S C+P L + W T SDH
Sbjct: 159 LVLLNQGNQSTWIGANGRNSIVDVSFCSPSLVGDNNWRVCDET-PSDH 205
>UniRef50_Q9Q919 Cluster: Gp052L; n=2; Leporipoxvirus|Rep: Gp052L -
Rabbit fibroma virus
Length = 350
Score = 32.7 bits (71), Expect = 7.9
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 34 DYW-L*NYCFQLNHSKRFFTRCSATLVKTEDSAIXLYEATSLIRQGS*MQTNQHYLIYIS 210
++W L N F+ H K FFT C T++ T + L + L+ +++ + YL ++S
Sbjct: 91 EFWRLYNSLFRFTHCKSFFTACMYTIIATLSMLVTLVLSNKLLYAVDMIESIESYL-FVS 149
Query: 211 HEVLA 225
+ A
Sbjct: 150 QKTPA 154
>UniRef50_Q9Y027 Cluster: Reverse transcriptase; n=3; Trypanosoma
cruzi|Rep: Reverse transcriptase - Trypanosoma cruzi
Length = 608
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = -3
Query: 143 SYRXIALSSVLTKVAEHLVKNRLEW 69
SYR I+L+S+++KVAE +V RL W
Sbjct: 134 SYRPISLTSIVSKVAEKMVLKRLLW 158
>UniRef50_Q5EFG6 Cluster: Reverse transcriptase; n=2; Bothriurus
flavidus|Rep: Reverse transcriptase - Bothriurus
flavidus
Length = 193
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = -3
Query: 161 RINDVASYRXIALSSVLTKVAEHLVKNRL 75
R DV SYR IAL+SV K E LV RL
Sbjct: 58 RRTDVTSYRPIALTSVFAKTLERLVLQRL 86
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,164,660
Number of Sequences: 1657284
Number of extensions: 8424688
Number of successful extensions: 18065
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 16997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18043
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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