Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_J24
(649 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 40 9e-05
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 38 3e-04
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 33 0.006
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 30 0.073
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 29 0.17
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 27 0.51
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 26 1.2
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 25 1.6
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 25 1.6
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 25 2.7
AY176050-1|AAO19581.1| 522|Anopheles gambiae cytochrome P450 CY... 24 3.6
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 24 3.6
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 39.5 bits (88), Expect = 9e-05
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -3
Query: 497 NCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGS-PTRRTKPNEKPSAVDLSICTPDLA 321
N H +G + G L++++++ L +LN GS PT + +PS +D++ TP L
Sbjct: 125 NAWHTEWGSRRNNLRGEELLQMVEVLGLSILNNGSAPTFIGRGAARPSVIDVTFATPSLV 184
Query: 320 XXHXW 306
W
Sbjct: 185 LHDTW 189
Score = 25.8 bits (54), Expect = 1.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 146 ASYRXIALSSVLTKVAEHLVKNRL 75
+SYR +++ L KV E L+ NRL
Sbjct: 502 SSYRPLSMLDALGKVLEQLILNRL 525
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 37.9 bits (84), Expect = 3e-04
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = -3
Query: 479 FGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAVDLSICTPDLAXXHXWYT 300
+G +T+ G ++E NL L+N G + N + S +DL+ C+P LA W
Sbjct: 128 WGSKSTNARGNAVLEHFSRLNLVLVNVGFCPTFVR-NSRTSIIDLTFCSPALASSMNWRV 186
Query: 299 SSXTFGSDH 273
S+ SDH
Sbjct: 187 SNAYTLSDH 195
Score = 23.8 bits (49), Expect = 4.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 211 VKYKLNNADWSAFKNLVESMMLP 143
VK N+A+W A + MM+P
Sbjct: 546 VKNAFNSANWEAIHAALSKMMIP 568
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 33.5 bits (73), Expect = 0.006
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 416 LCLLNTGSPTRRTKPNEKPSAVDLSICTPDLAXXHXWYTSSXTFGSDH 273
L LLN G+ + N + S VD+S C+P L + W T SDH
Sbjct: 159 LVLLNQGNQSTWIGANGRNSIVDVSFCSPSLVGDNNWRVCDET-PSDH 205
Score = 28.7 bits (61), Expect = 0.17
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 146 ASYRXIALSSVLTKVAEHLVKNRL 75
+SYR I L SVL K+ E L++ RL
Sbjct: 488 SSYRPICLLSVLGKILERLIQRRL 511
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 29.9 bits (64), Expect = 0.073
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = -3
Query: 479 FGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAVDLSICTPDLAXXHXWYT 300
+G T++ G ++E + L N G+ T N++ S VD++ C+ L+ W
Sbjct: 126 WGSKRTNSRGDAVLESFARLGVTLGNAGT-TPTFNRNKRTSIVDITFCSTTLSERLNWRV 184
Query: 299 SSXTFGSDH 273
S SDH
Sbjct: 185 SDALTLSDH 193
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 28.7 bits (61), Expect = 0.17
Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = -3
Query: 497 NCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSP-TRRTKPNEKPSAVDLSICTPDLA 321
N H +G G L+ + +L +LN G+ T S VD++ TP +A
Sbjct: 126 NAWHVEWGSERNSEKGEELLSAIQQLDLVVLNQGTTSTFDGNGAATASIVDVAFATPTIA 185
Query: 320 XXHXWYTSSXTFGSDH 273
W SDH
Sbjct: 186 QPGTWNVCGDYSYSDH 201
Score = 28.3 bits (60), Expect = 0.22
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 185 LVCI*EPCRINDVA-SYRXIALSSVLTKVAEHLVKNRLEWF 66
LV I +P + + V+ SYR + + L KV E L+ NRL F
Sbjct: 474 LVLIPKPGKPSGVSCSYRPLCMLDALGKVLERLILNRLHEF 514
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 27.1 bits (57), Expect = 0.51
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -3
Query: 410 LLNTGSPTRRTKPNEKPSAVDLSICTPDLAXXHXWYTSSXTFGSDH 273
LLN GS P + S VDL+ + +A W S SDH
Sbjct: 156 LLNDGSTPTYVGPG-RTSVVDLTFASRTVARSFKWEVLSSYMNSDH 200
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 25.8 bits (54), Expect = 1.2
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -3
Query: 416 LCLLNTGSPTRRTKPNEKPSAVDLSICTPDLAXXHXWYTSSXTFGSDH 273
+ L+N G T T E+ SA+DL+ + L W SDH
Sbjct: 156 MVLMNNGQDTFVTP--ERKSAIDLTFVSQSLMETTGWEVLPDYMNSDH 201
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 25.4 bits (53), Expect = 1.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 146 ASYRXIALSSVLTKVAEHLVKNRL 75
+SYR + + L KV E L+ NRL
Sbjct: 548 SSYRPLCMLDALGKVLERLILNRL 571
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 25.4 bits (53), Expect = 1.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 146 ASYRXIALSSVLTKVAEHLVKNRL 75
+SYR + + L KV E L+ NRL
Sbjct: 563 SSYRPLCMLDALGKVLERLILNRL 586
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 24.6 bits (51), Expect = 2.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 143 SYRXIALSSVLTKVAEHLVKNRL 75
SYR + + L KV E L+ NRL
Sbjct: 556 SYRPLCMLDALGKVLEKLILNRL 578
>AY176050-1|AAO19581.1| 522|Anopheles gambiae cytochrome P450
CYP12F2 protein.
Length = 522
Score = 24.2 bits (50), Expect = 3.6
Identities = 15/72 (20%), Positives = 37/72 (51%)
Frame = -1
Query: 373 LMRSLVQLTYQFVLQILLXXIXGTPHHXLLAVIISRLSYPXXLDALLIKKREPRVKYKLN 194
L+R++ +LTY+ +++ L TP + + + L+ + A + + ++ K N
Sbjct: 240 LVRNIFELTYKLDVEMSLWKYISTPSYRKMMSVFDDLT--ALIMAKIDEAKQRLEKQPSN 297
Query: 193 NADWSAFKNLVE 158
+A+ S + L++
Sbjct: 298 SANQSVLEKLLK 309
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 24.2 bits (50), Expect = 3.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 146 ASYRXIALSSVLTKVAEHLVKNRLEWF 66
+S+R + + + L KV E L+ NRL F
Sbjct: 508 SSFRPLGMLNGLGKVLERLILNRLNEF 534
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,444
Number of Sequences: 2352
Number of extensions: 9439
Number of successful extensions: 28
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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