Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_J23
(646 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC839.17c |fkh1||FKBP-type peptidyl-prolyl cis-trans isomerase... 144 1e-35
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 89 4e-19
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 76 5e-15
SPAC1486.02c |ucp14||UBA domain protein Ucp14|Schizosaccharomyce... 27 2.3
SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces po... 27 2.3
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 27 3.1
SPAC16C9.02c |||S-methyl-5-thioadenosine phosphorylase|Schizosac... 26 5.3
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 26 5.3
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 25 7.1
>SPBC839.17c |fkh1||FKBP-type peptidyl-prolyl cis-trans isomerase
Fkh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 112
Score = 144 bits (349), Expect = 1e-35
Identities = 65/107 (60%), Positives = 79/107 (73%)
Frame = +3
Query: 72 MGVTVETISPGDESTYPKSGQTVXVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGW 251
MGV + IS G+ +PK G + +HYTGTLTNGKKFDSS DRG PF IG ++IRGW
Sbjct: 1 MGVEKQVISSGNGQDFPKPGDRITMHYTGTLTNGKKFDSSVDRGSPFVCTIGVGQLIRGW 60
Query: 252 DEGVAXMSVXERAKLTCSPDYAYGQQGHPXVIPPNSTLIFDVXLLRL 392
DEGV MS+ E+AKLT +PDY YG +G P +IPPNSTL+FDV LL +
Sbjct: 61 DEGVPKMSLGEKAKLTITPDYGYGPRGFPGLIPPNSTLLFDVELLAI 107
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 89.4 bits (212), Expect = 4e-19
Identities = 48/106 (45%), Positives = 63/106 (59%)
Frame = +3
Query: 75 GVTVETISPGDESTYPKSGQTVXVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWD 254
GV V + G ++ +G+ V + Y G L NGK FD + +GKPF F +G+ EVIRGWD
Sbjct: 258 GVVVTDVKTGSGAS-ATNGKKVEMRYIGKLENGKVFDKNT-KGKPFAFILGRGEVIRGWD 315
Query: 255 EGVAXMSVXERAKLTCSPDYAYGQQGHPXVIPPNSTLIFDVXLLRL 392
GVA M K+T AYG Q P IP NSTL+F+V L+R+
Sbjct: 316 VGVAGMQEGGERKITIPAPMAYGNQSIPG-IPKNSTLVFEVKLVRV 360
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 75.8 bits (178), Expect = 5e-15
Identities = 45/103 (43%), Positives = 55/103 (53%)
Frame = +3
Query: 78 VTVETISPGDESTYPKSGQTVXVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDE 257
VTV+ GD K + V + Y G LTNGK FD + GKPF F +G EVI+GWD
Sbjct: 260 VTVQDKVKGDGPA-AKRKKRVSMRYIGRLTNGKVFDKNIT-GKPFTFNLGLEEVIKGWDV 317
Query: 258 GVAXMSVXERAKLTCSPDYAYGQQGHPXVIPPNSTLIFDVXLL 386
G+ M V + AYG + P IP NS L+FDV LL
Sbjct: 318 GIVGMQVGGERTIHIPAAMAYGSKRLPG-IPANSDLVFDVKLL 359
>SPAC1486.02c |ucp14||UBA domain protein Ucp14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 372
Score = 27.1 bits (57), Expect = 2.3
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +2
Query: 485 FYHI---LSLKSLYQHYVYLXWKYIY---TYAIRKNFILY 586
F+HI L L S YQ++ L W++IY T + FI+Y
Sbjct: 36 FFHINFGLHLLSHYQYWRILLWQFIYWNSTEVFQALFIIY 75
>SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/33 (39%), Positives = 24/33 (72%), Gaps = 5/33 (15%)
Frame = +2
Query: 503 LKSLYQHYV---YLXW-KYI-YTYAIRKNFILY 586
L ++++H+ YL W K+I Y+Y +R+N++LY
Sbjct: 337 LYAMFKHWGQDGYLEWLKHIRYSYTLRRNYLLY 369
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 22 RERGFLSRKNREIHCK*WVLLLKL 93
RER FL +K +I C + LL+KL
Sbjct: 145 RERAFLRKKRTKIQCSHFDLLVKL 168
>SPAC16C9.02c |||S-methyl-5-thioadenosine
phosphorylase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 25.8 bits (54), Expect = 5.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 201 GKPFKFRIGKSEVIRGWDEGVAXMSVXERAKLTCSPDYAY 320
G F R +S + R W + MSV AKL + AY
Sbjct: 176 GPAFSTR-AESNLYRSWGASIINMSVIPEAKLAREAEIAY 214
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 25.8 bits (54), Expect = 5.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 78 VTVETISPGDESTYPKSGQTVXVHYTGTLTNGKKFDS 188
V+ ++ GD+ +P +GQT+ + T N KK S
Sbjct: 175 VSNRSLEAGDDGVHPTAGQTLNIAPTMNDLNKKKSSS 211
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 249 WDEGVAXMSVXERAKLTCSPDYAYGQQGHPXVIPPNSTLI 368
+D +S E A C P+ +Y + V+PP+ ++I
Sbjct: 207 FDSKAHVVSENELADYFCLPEESYVMYSNKLVVPPSDSII 246
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,424,426
Number of Sequences: 5004
Number of extensions: 46715
Number of successful extensions: 140
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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