Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J23
         (646 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...   169   5e-44
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   2.7  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   2.7  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    24   4.7  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   4.7  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.3  

>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score =  169 bits (412), Expect = 5e-44
 Identities = 76/108 (70%), Positives = 87/108 (80%)
 Frame = +3

Query: 72  MGVTVETISPGDESTYPKSGQTVXVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGW 251
           MGV +  I+ GD++T+PK GQT  VHYTGTL +G  FDSSR RGKPFKF +GK EVIRGW
Sbjct: 1   MGVQIVPIANGDQTTFPKPGQTAVVHYTGTLDDGTVFDSSRTRGKPFKFSVGKGEVIRGW 60

Query: 252 DEGVAXMSVXERAKLTCSPDYAYGQQGHPXVIPPNSTLIFDVXLLRLE 395
           DEGVA MSV +RAKL CSPDYAYG +GHP VIPPN+ L FDV LLR+E
Sbjct: 61  DEGVAQMSVGQRAKLVCSPDYAYGSRGHPGVIPPNARLTFDVELLRVE 108


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 341 SHTSQLYTYFRCXTSTSRINTICNQKLLQHHCYVNCP 451
           SHT Q      C  S SRI+T+ +   ++H   +N P
Sbjct: 545 SHTPQRSLCPYCPASYSRIDTLRSHLRIKHADRLNAP 581


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 341 SHTSQLYTYFRCXTSTSRINTICNQKLLQHHCYVNCP 451
           SHT Q      C  S SRI+T+ +   ++H   +N P
Sbjct: 521 SHTPQRSLCPYCPASYSRIDTLRSHLRIKHADRLNAP 557


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 405 FVTKNYYNIIVMSIAL*NSKSQLITLFFIT 494
           FVT    N IV+ I   N + + +T FFIT
Sbjct: 147 FVTAVIGNSIVLFIVQSNPRMRTVTNFFIT 176


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
 Frame = -3

Query: 110 LVSWTDSFNSNTHY---LQCISLFFRDKN--PRSRNA 15
           LV  T S N NTHY   L+C+  + R +   P   NA
Sbjct: 21  LVLTTTSANENTHYLPPLECVDPYGRPQRCIPEFENA 57


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 82  LLKLSVQETSRPTPNQDRLXLFTTLEHLR 168
           L +LSV+++ +P P  + L +F+     R
Sbjct: 818 LSELSVKKSKKPIPKSNALLIFSPTNRFR 846


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,002
Number of Sequences: 2352
Number of extensions: 11551
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)