Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J21
         (651 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q96IX5 Cluster: Up-regulated during skeletal muscle gro...    45   0.001
UniRef50_Q9W2U8 Cluster: CG15304-PA; n=8; Endopterygota|Rep: CG1...    41   0.030
UniRef50_A5K8N4 Cluster: Putative uncharacterized protein; n=1; ...    36   1.1  
UniRef50_Q8T8T2 Cluster: AT30562p; n=3; Sophophora|Rep: AT30562p...    34   2.6  
UniRef50_P33332 Cluster: Exocyst complex component SEC3; n=2; Sa...    33   7.8  

>UniRef50_Q96IX5 Cluster: Up-regulated during skeletal muscle growth
           protein 5; n=9; Euteleostomi|Rep: Up-regulated during
           skeletal muscle growth protein 5 - Homo sapiens (Human)
          Length = 58

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 21/47 (44%), Positives = 27/47 (57%)
 Frame = +1

Query: 73  MAGDSSVDESQLKGLAKYFNSXTNRGRLXTAXATYAVMGAVILYFTL 213
           MAG  S  + Q  G+ KYFNS T  GR+    ATY  +  ++LYF L
Sbjct: 1   MAGPESDAQYQFTGIKKYFNSYTLTGRMNCVLATYGSIALIVLYFKL 47


>UniRef50_Q9W2U8 Cluster: CG15304-PA; n=8; Endopterygota|Rep:
           CG15304-PA - Drosophila melanogaster (Fruit fly)
          Length = 48

 Score = 40.7 bits (91), Expect = 0.030
 Identities = 20/37 (54%), Positives = 23/37 (62%)
 Frame = +1

Query: 103 QLKGLAKYFNSXTNRGRLXTAXATYAVMGAVILYFTL 213
           +L GL+K FN  T  GR   A ATYAVMG +I Y  L
Sbjct: 7   KLTGLSKIFNGTTMSGRANVAKATYAVMGLLIAYQVL 43


>UniRef50_A5K8N4 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 1915

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
 Frame = +3

Query: 123  ILQQSXKQRKIXYXXSHICSNGSSHPLLHTET*IQEMNYKQNLLACX-----CKGLLSYI 287
            +L +  ++  +    +H+  NG+ H LL     I  + YK+  ++       C  L  Y 
Sbjct: 819  LLNEFCEKDLVTIFTNHLKYNGNEHDLLLLNKIINILIYKKRNISLSNNIVVCNSLAKYQ 878

Query: 288  VHN*N--HVNKSNFF**XXXXXXXLSNLVRLSYSWG--TVQCVGPIRFTLVMDKITHQQE 455
            + N N   ++K +FF         + +LV L YSWG   V+ + P+ +  V+ +I  + E
Sbjct: 879  LFNNNFFSLDKRSFF--DEVTDANIHSLVALLYSWGKLKVRNLDPLFYQRVVKEIIKKME 936


>UniRef50_Q8T8T2 Cluster: AT30562p; n=3; Sophophora|Rep: AT30562p -
           Drosophila melanogaster (Fruit fly)
          Length = 336

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = +1

Query: 64  QIRMAGDSSVDESQLKGLAKYFNSXTNRGRLXTAXATYAVMGAVILYFTL 213
           QI+++  S V  +   G  KYFN  T  GR   A ATYA +  + + + L
Sbjct: 24  QIQISRSSPV--AMADGFKKYFNGTTINGRANVAKATYATLALLFIVYKL 71


>UniRef50_P33332 Cluster: Exocyst complex component SEC3; n=2;
            Saccharomyces cerevisiae|Rep: Exocyst complex component
            SEC3 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 1336

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 23/94 (24%), Positives = 44/94 (46%)
 Frame = +3

Query: 276  LSYIVHN*NHVNKSNFF**XXXXXXXLSNLVRLSYSWGTVQCVGPIRFTLVMDKITHQQE 455
            +S I+ N N+VN +N           L N++ L+Y+   ++ +     T +++   + QE
Sbjct: 1222 VSNIIENTNNVNMTNPSRWAAYSRQNLENIL-LAYTSHEIETLVKRLHTHMVNDFGYHQE 1280

Query: 456  NXYISFYLHRCWSSLFKVLVCIYLKITVIN*KKY 557
            N   +    + WS +    V +YLK+  +  K Y
Sbjct: 1281 NAINNVLCDKLWSCIQGQTVSLYLKLYTVIDKHY 1314


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,421,511
Number of Sequences: 1657284
Number of extensions: 8518671
Number of successful extensions: 16090
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16090
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)