Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J21
         (651 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1805.05 |cki3||serine/threonine protein kinase Cki3|Schizosa...    25   7.2  
SPBC1347.06c |cki1||serine/threonine protein kinase Cki1|Schizos...    25   7.2  

>SPAC1805.05 |cki3||serine/threonine protein kinase
           Cki3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 439

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 94  DESQLKGLAKYFNSXTNRGRLXTAXATYAVMGAVILYF 207
           +   L G A+Y +  T+ GR  +       MG V +YF
Sbjct: 177 EHKSLSGTARYMSINTHLGREQSRRDDLESMGHVFMYF 214


>SPBC1347.06c |cki1||serine/threonine protein kinase
           Cki1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 446

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 94  DESQLKGLAKYFNSXTNRGRLXTAXATYAVMGAVILYF 207
           ++  L G A+Y +  T+ GR  +       +G V +YF
Sbjct: 174 EKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYF 211


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,184,675
Number of Sequences: 5004
Number of extensions: 38851
Number of successful extensions: 71
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)