Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J21
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0233 + 1876940-1877509,1907940-1908195,1908290-1908589,190...    29   4.2  
08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-26...    28   7.4  

>08_01_0233 +
           1876940-1877509,1907940-1908195,1908290-1908589,
           1908777-1908939,1908958-1908994,1910122-1910742
          Length = 648

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1

Query: 61  FQIRMAGDSSVDESQLKGLAKYFNSXTNRGRLXT 162
           F ++M GD  VD+   KGL  Y N     GRL T
Sbjct: 465 FNLKMKGDDGVDKDFSKGLLPY-NVVCRTGRLET 497


>08_01_0036 -
           267236-268165,268255-268299,268485-268574,269485-269805,
           269895-270098,271532-271664,271810-271881,273106-273168,
           273252-275034,275169-275217
          Length = 1229

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -1

Query: 336 LLIKRNWICSHDFNYVLYNLT 274
           L I RNW   HD  +VLY LT
Sbjct: 398 LSIYRNWPSMHDNRFVLYKLT 418


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,838,379
Number of Sequences: 37544
Number of extensions: 211287
Number of successful extensions: 380
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)