Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J21
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071736-1|AAL49358.1|   48|Drosophila melanogaster RH45340p pro...    40   0.002
AY071289-1|AAL48911.1|   48|Drosophila melanogaster RE31692p pro...    40   0.002
AE014298-1455|AAF46590.1|   48|Drosophila melanogaster CG15304-P...    40   0.002
AY075287-1|AAL68154.2|  336|Drosophila melanogaster AT30562p pro...    34   0.19 
AE014298-3011|AAF50912.1|  302|Drosophila melanogaster CG15459-P...    33   0.44 
Y14277-1|CAA74654.1| 1116|Drosophila melanogaster nuclear protei...    29   7.2  
AY061410-1|AAL28958.1| 1127|Drosophila melanogaster LD34181p pro...    29   7.2  
AE014134-1198|AAF52463.2| 1127|Drosophila melanogaster CG3423-PA...    29   7.2  

>AY071736-1|AAL49358.1|   48|Drosophila melanogaster RH45340p
           protein.
          Length = 48

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 20/37 (54%), Positives = 23/37 (62%)
 Frame = +1

Query: 103 QLKGLAKYFNSXTNRGRLXTAXATYAVMGAVILYFTL 213
           +L GL+K FN  T  GR   A ATYAVMG +I Y  L
Sbjct: 7   KLTGLSKIFNGTTMSGRANVAKATYAVMGLLIAYQVL 43


>AY071289-1|AAL48911.1|   48|Drosophila melanogaster RE31692p
           protein.
          Length = 48

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 20/37 (54%), Positives = 23/37 (62%)
 Frame = +1

Query: 103 QLKGLAKYFNSXTNRGRLXTAXATYAVMGAVILYFTL 213
           +L GL+K FN  T  GR   A ATYAVMG +I Y  L
Sbjct: 7   KLTGLSKIFNGTTMSGRANVAKATYAVMGLLIAYQVL 43


>AE014298-1455|AAF46590.1|   48|Drosophila melanogaster CG15304-PA
           protein.
          Length = 48

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 20/37 (54%), Positives = 23/37 (62%)
 Frame = +1

Query: 103 QLKGLAKYFNSXTNRGRLXTAXATYAVMGAVILYFTL 213
           +L GL+K FN  T  GR   A ATYAVMG +I Y  L
Sbjct: 7   KLTGLSKIFNGTTMSGRANVAKATYAVMGLLIAYQVL 43


>AY075287-1|AAL68154.2|  336|Drosophila melanogaster AT30562p
           protein.
          Length = 336

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = +1

Query: 64  QIRMAGDSSVDESQLKGLAKYFNSXTNRGRLXTAXATYAVMGAVILYFTL 213
           QI+++  S V  +   G  KYFN  T  GR   A ATYA +  + + + L
Sbjct: 24  QIQISRSSPV--AMADGFKKYFNGTTINGRANVAKATYATLALLFIVYKL 71


>AE014298-3011|AAF50912.1|  302|Drosophila melanogaster CG15459-PA
           protein.
          Length = 302

 Score = 32.7 bits (71), Expect = 0.44
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 112 GLAKYFNSXTNRGRLXTAXATYAVMGAVILYFTL 213
           G  KYFN  T  GR   A ATYA +  + + + L
Sbjct: 4   GFKKYFNGTTINGRANVAKATYATLALLFIVYKL 37


>Y14277-1|CAA74654.1| 1116|Drosophila melanogaster nuclear protein
           SA protein.
          Length = 1116

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +3

Query: 213 ET*IQEMNYKQNLLACXCKGLLSYIV 290
           ET I+E++ K+N LAC CK ++  I+
Sbjct: 877 ETRIEELHKKRNFLACYCKLVVYNII 902


>AY061410-1|AAL28958.1| 1127|Drosophila melanogaster LD34181p
           protein.
          Length = 1127

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +3

Query: 213 ET*IQEMNYKQNLLACXCKGLLSYIV 290
           ET I+E++ K+N LAC CK ++  I+
Sbjct: 888 ETRIEELHKKRNFLACYCKLVVYNII 913


>AE014134-1198|AAF52463.2| 1127|Drosophila melanogaster CG3423-PA
           protein.
          Length = 1127

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +3

Query: 213 ET*IQEMNYKQNLLACXCKGLLSYIV 290
           ET I+E++ K+N LAC CK ++  I+
Sbjct: 888 ETRIEELHKKRNFLACYCKLVVYNII 913


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,532,990
Number of Sequences: 53049
Number of extensions: 394786
Number of successful extensions: 666
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)