Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_J19
(651 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 179 2e-45
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 178 4e-45
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 170 9e-43
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 165 4e-41
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 163 1e-40
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 144 5e-35
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 135 2e-32
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 81 1e-15
06_03_1237 + 28602250-28604196 28 5.6
02_05_0552 - 29911280-29912541,29912633-29912762 28 7.4
10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097 27 9.8
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 179 bits (435), Expect = 2e-45
Identities = 92/174 (52%), Positives = 119/174 (68%), Gaps = 4/174 (2%)
Frame = +2
Query: 140 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMXEVTET--GVELXNEERNLLSVAYXNVVG 313
S + +EE V AKLAEQAERY++M M +V +T EL EERNLLSVAY NV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 314 ARRSSWRVISSIEQKTE--GSERKQQMAKXYRVKVQXELXXICYDVLGLLDKHLIPKASN 487
ARR+SWR+ISSIEQK E G+E + + K YR K++ EL IC +L LLD HL+P ++
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 339
Query: 488 PQSKVFYLKMKXDYYRYLAQVATGXTXHSVVXDSQKAYQDAFEISKAKMQPTHP 649
P+SKVFYLKMK DYYRYLA+ TG ++ AY+ A +I+ A++ PTHP
Sbjct: 340 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHP 393
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 178 bits (433), Expect = 4e-45
Identities = 91/174 (52%), Positives = 120/174 (68%), Gaps = 4/174 (2%)
Frame = +2
Query: 140 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMXEVTET--GVELXNEERNLLSVAYXNVVG 313
S+ + +EE V AKLAEQAERY++M M +V +T EL EERNLLSVAY NV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 314 ARRSSWRVISSIEQKTE--GSERKQQMAKXYRVKVQXELXXICYDVLGLLDKHLIPKASN 487
ARR+SWR+ISSIEQK E G+E + + K YR K++ EL IC +L LL+ HL+P ++
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121
Query: 488 PQSKVFYLKMKXDYYRYLAQVATGXTXHSVVXDSQKAYQDAFEISKAKMQPTHP 649
P+SKVFYLKMK DYYRYLA+ TG ++ AY+ A +I+ A++ PTHP
Sbjct: 122 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHP 175
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 170 bits (413), Expect = 9e-43
Identities = 88/169 (52%), Positives = 114/169 (67%), Gaps = 4/169 (2%)
Frame = +2
Query: 155 VDKEELVQRAKLAEQAERYDDMAAAMXEVTETG--VELXNEERNLLSVAYXNVVGARRSS 328
+ +EE V AKLAEQAERY++M M +V +T EL EERNLLSVAY NV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 329 WRVISSIEQKTEG--SERKQQMAKXYRVKVQXELXXICYDVLGLLDKHLIPKASNPQSKV 502
WR++SSIEQK EG +E + K YR K++ EL IC +L LLD HL+P ++ +SKV
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKV 120
Query: 503 FYLKMKXDYYRYLAQVATGXTXHSVVXDSQKAYQDAFEISKAKMQPTHP 649
FYLKMK DY+RYLA+ TG + AY+ A +I+ A + PTHP
Sbjct: 121 FYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHP 169
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 165 bits (400), Expect = 4e-41
Identities = 88/173 (50%), Positives = 113/173 (65%), Gaps = 4/173 (2%)
Frame = +2
Query: 143 STMSVDKEELVQRAKLAEQAERYDDMAAAMXEVTETGV--ELXNEERNLLSVAYXNVVGA 316
S +EE V AKLAEQAERY++M M +V +T EL EERNLLSVAY NV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 317 RRSSWRVISSIEQKTE--GSERKQQMAKXYRVKVQXELXXICYDVLGLLDKHLIPKASNP 490
RR+SWR+ISSIEQK E G+E K YR +++ EL IC +L LLD HL+P A+
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAA 121
Query: 491 QSKVFYLKMKXDYYRYLAQVATGXTXHSVVXDSQKAYQDAFEISKAKMQPTHP 649
+SKVFYLKMK DY+RYLA+ +G ++ AY+ A +I+ A + THP
Sbjct: 122 ESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHP 174
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 163 bits (395), Expect = 1e-40
Identities = 86/170 (50%), Positives = 111/170 (65%), Gaps = 7/170 (4%)
Frame = +2
Query: 161 KEELVQRAKLAEQAERYDDMAAAMXEVTET-----GVELXNEERNLLSVAYXNVVGARRS 325
+EE+V AKLAEQAERY++M M +V G EL EERNLLSVAY NV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 326 SWRVISSIEQKTEG--SERKQQMAKXYRVKVQXELXXICYDVLGLLDKHLIPKASNPQSK 499
SWR++SSIEQK EG + A+ YR +V+ EL IC +L LLD+ L+P A+ +K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 500 VFYLKMKXDYYRYLAQVATGXTXHSVVXDSQKAYQDAFEISKAKMQPTHP 649
VFYLKMK DY+RYLA+ TG + AYQ A +I+ ++ PTHP
Sbjct: 130 VFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHP 179
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 144 bits (349), Expect = 5e-35
Identities = 72/135 (53%), Positives = 89/135 (65%), Gaps = 2/135 (1%)
Frame = +2
Query: 251 GVELXNEERNLLSVAYXNVVGARRSSWRVISSIEQKTEGSERKQQMA--KXYRVKVQXEL 424
G EL EERNLLSVAY NV+GARR+SWR+ISSIEQK EG A + YR K++ EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 425 XXICYDVLGLLDKHLIPKASNPQSKVFYLKMKXDYYRYLAQVATGXTXHSVVXDSQKAYQ 604
IC +L LLD HL+P A +SKVFYLKMK DY+RYLA+ +G + AY+
Sbjct: 78 ARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYK 137
Query: 605 DAFEISKAKMQPTHP 649
A +I+ A + PTHP
Sbjct: 138 AAQDIALADLAPTHP 152
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 135 bits (327), Expect = 2e-32
Identities = 63/149 (42%), Positives = 94/149 (63%)
Frame = +2
Query: 158 DKEELVQRAKLAEQAERYDDMAAAMXEVTETGVELXNEERNLLSVAYXNVVGARRSSWRV 337
++E++V+ AKLAEQAERYDDM M + V++ EER L SV + +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 338 ISSIEQKTEGSERKQQMAKXYRVKVQXELXXICYDVLGLLDKHLIPKASNPQSKVFYLKM 517
+ S+EQK ++ Y+ KV+ EL +C +VL ++ H +P A++ ++ VF+ KM
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKM 122
Query: 518 KXDYYRYLAQVATGXTXHSVVXDSQKAYQ 604
K DYYRYLA+ +TG + S AYQ
Sbjct: 123 KGDYYRYLAEFSTGTEKKAATDQSLMAYQ 151
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 80.6 bits (190), Expect = 1e-15
Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
Frame = +2
Query: 218 MAAAMXEVTETGVELXNEERNLLSVAYXNVVGARRSSWRVISSIE--QKTEGSERKQQMA 391
M AM V + L EERNLLSV Y N++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 392 KXYRVKVQXELXXICYDVLGLLDKHLIPKASNPQSKVFYLKMKXDYYRYLAQVATGXTXH 571
YR KV+ E+ IC DV+ ++DK K DYYRYLA+ TG
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK------------------KGDYYRYLAEFKTGTEKI 102
Query: 572 SVVXDSQKAYQ 604
V S AY+
Sbjct: 103 EVSELSLNAYE 113
>06_03_1237 + 28602250-28604196
Length = 648
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +2
Query: 449 GLLDKHLIPKASNPQSKVFYLKMKXDYYRYLAQVATGXTXHSVVXDSQKAYQDAFEISKA 628
GL+D + + SKVFY + + Y Y + +A G H ++ +++ +++A
Sbjct: 314 GLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIA-GLASHGRASEAIALFKEM--VNRA 370
Query: 629 KMQPTH 646
++P H
Sbjct: 371 NVEPNH 376
>02_05_0552 - 29911280-29912541,29912633-29912762
Length = 463
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 86 SNTFFPFRQGHQ*ISPLPSSTMSVDKEELVQRAKL-AEQAERYDDMAAAM 232
S T H SP+PSS +EEL++R +L AE +R M AA+
Sbjct: 50 SGTTVALNHRHGPCSPVPSSKKRPTEEELLKRDQLRAEHIQRKFAMNAAV 99
>10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097
Length = 214
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 375 LSEPSVFCSIEEMTRHDDRRAPTTXL*ATERR 280
L++ S CSI ++TR D + A T TER+
Sbjct: 154 LADKSTGCSIRKITRSDKKPAKTRSFVETERK 185
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,928,164
Number of Sequences: 37544
Number of extensions: 317501
Number of successful extensions: 759
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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