Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_J19
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 257 4e-69
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 257 4e-69
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 243 7e-65
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 241 2e-64
Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC024211-4|AAP82631.1| 487|Caenorhabditis elegans Hypothetical ... 28 5.0
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 257 bits (630), Expect = 4e-69
Identities = 128/167 (76%), Positives = 141/167 (84%)
Frame = +2
Query: 149 MSVDKEELVQRAKLAEQAERYDDMAAAMXEVTETGVELXNEERNLLSVAYXNVVGARRSS 328
MS KEELV RAKLAEQAERYDDMAA+M +VTE G EL NEERNLLSVAY NVVGARRSS
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60
Query: 329 WRVISSIEQKTEGSERKQQMAKXYRVKVQXELXXICYDVLGLLDKHLIPKASNPQSKVFY 508
WRVISSIEQKTEGSE+KQQMAK YR KV+ EL IC DVL LLDK LIPKA +SKVFY
Sbjct: 61 WRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDKFLIPKAGAAESKVFY 120
Query: 509 LKMKXDYYRYLAQVATGXTXHSVVXDSQKAYQDAFEISKAKMQPTHP 649
LKMK DYYRYLA+VA+G +SVV SQ++YQ+AF+I+K KMQPTHP
Sbjct: 121 LKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHP 167
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 257 bits (630), Expect = 4e-69
Identities = 128/167 (76%), Positives = 141/167 (84%)
Frame = +2
Query: 149 MSVDKEELVQRAKLAEQAERYDDMAAAMXEVTETGVELXNEERNLLSVAYXNVVGARRSS 328
MS KEELV RAKLAEQAERYDDMAA+M +VTE G EL NEERNLLSVAY NVVGARRSS
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60
Query: 329 WRVISSIEQKTEGSERKQQMAKXYRVKVQXELXXICYDVLGLLDKHLIPKASNPQSKVFY 508
WRVISSIEQKTEGSE+KQQMAK YR KV+ EL IC DVL LLDK LIPKA +SKVFY
Sbjct: 61 WRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDKFLIPKAGAAESKVFY 120
Query: 509 LKMKXDYYRYLAQVATGXTXHSVVXDSQKAYQDAFEISKAKMQPTHP 649
LKMK DYYRYLA+VA+G +SVV SQ++YQ+AF+I+K KMQPTHP
Sbjct: 121 LKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHP 167
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 243 bits (595), Expect = 7e-65
Identities = 126/167 (75%), Positives = 138/167 (82%)
Frame = +2
Query: 149 MSVDKEELVQRAKLAEQAERYDDMAAAMXEVTETGVELXNEERNLLSVAYXNVVGARRSS 328
MS EELVQRAKLAEQAERYDDMAAAM +VTE G EL NEERNLLSVAY NVVGARRSS
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60
Query: 329 WRVISSIEQKTEGSERKQQMAKXYRVKVQXELXXICYDVLGLLDKHLIPKASNPQSKVFY 508
WRVISSIEQKTEGSE+KQQ+AK YRVKV+ EL IC DVL LLD+ LI KA +SKVFY
Sbjct: 61 WRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAGAAESKVFY 120
Query: 509 LKMKXDYYRYLAQVATGXTXHSVVXDSQKAYQDAFEISKAKMQPTHP 649
LKMK DYYRYLA+VA+ +VV SQKAYQ+A +I+K KMQPTHP
Sbjct: 121 LKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHP 166
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 241 bits (591), Expect = 2e-64
Identities = 125/167 (74%), Positives = 137/167 (82%)
Frame = +2
Query: 149 MSVDKEELVQRAKLAEQAERYDDMAAAMXEVTETGVELXNEERNLLSVAYXNVVGARRSS 328
MS EELVQRAKLAEQAERYDDMAAAM +VTE G EL NEERNLLSVAY NVVGARRSS
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60
Query: 329 WRVISSIEQKTEGSERKQQMAKXYRVKVQXELXXICYDVLGLLDKHLIPKASNPQSKVFY 508
WRVISSIEQKTEGSE+KQQ+AK YRVKV+ EL IC DVL LLD+ LI KA +SK FY
Sbjct: 61 WRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAGAAESKAFY 120
Query: 509 LKMKXDYYRYLAQVATGXTXHSVVXDSQKAYQDAFEISKAKMQPTHP 649
LKMK DYYRYLA+VA+ +VV SQKAYQ+A +I+K KMQPTHP
Sbjct: 121 LKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHP 166
>Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical
protein M117.3 protein.
Length = 125
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +2
Query: 515 MKXDYYRYLAQVATGXTXHSVVXDSQKAYQDAFEISKAKMQPTHP 649
M D++RYL Q S+ AYQ+A I+K KMQPTHP
Sbjct: 1 MVADHFRYLVQY-DDINREEHAHKSRIAYQEALGIAKDKMQPTHP 44
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 32.3 bits (70), Expect = 0.31
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = +2
Query: 101 PFRQGHQ*ISPLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMXEVTETGV-ELXNEER 277
PFR+ SPL + + + R KLAEQA+R V ++GV EL +
Sbjct: 232 PFRKEFD--SPLHNYIYRTSRHSPLYRKKLAEQAQRMAVKNGTF--VNDSGVIELLSHLL 287
Query: 278 NLLSVAYXNVVGARRSSWRVISSIEQKTEGSERKQQMAK 394
+ ++VAY N+V + +I + +K +GS + ++++
Sbjct: 288 D-INVAYENLV-TKNEKLEIIGTFCEKNKGSFKVDELSR 324
>Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical
protein F27C8.1 protein.
Length = 493
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 6 RLAPQPSKPVYLFSARXKLIL--CLNL-LVQIHFSPSDKGISELVLFHRPRCPSTRKNWC 176
R P S+P+ + + L C+ L L+ + +P D GI L++ W
Sbjct: 404 RTMPDASRPIKVPLIWPAIFLAGCIALVLIPMVAAPRDTGIGLLIMLSAVPVYGIFIGWK 463
Query: 177 NVPNWPNKLSDMTT 218
N P W N+ D +T
Sbjct: 464 NKPKWFNEFIDSST 477
>AC024211-4|AAP82631.1| 487|Caenorhabditis elegans Hypothetical
protein Y76B12C.6 protein.
Length = 487
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 210 MTTWRPR*XK*RKPASNLXTRRGTSFQLLIXMS*VPDGHHGVSFP 344
MT + R + + A + TR G Q + +PD HH +FP
Sbjct: 97 MTEFAQREAQFYREAERISTRFGVELQSFLPQEVLPDEHHPSNFP 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,167,599
Number of Sequences: 27780
Number of extensions: 266401
Number of successful extensions: 612
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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