Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J18
         (653 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5E4H5 Cluster: Putative uncharacterized protein; n=1; ...    36   0.64 
UniRef50_Q2WEC5 Cluster: ATP-binding cassette transporter sub-fa...    33   4.5  
UniRef50_O44439 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_A5E4H5 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 415

 Score = 36.3 bits (80), Expect = 0.64
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
 Frame = +1

Query: 70  TKNLKETSRASAPTENQENNSEKV*QKPIGV*EINEKYR*QREGSRPKSPGIHSRVYLFV 249
           TKN KE +  +  +EN ENN   +    + + ++ E        S P SP  H RV+LF 
Sbjct: 195 TKNKKERNNETNISENGENNEVTLDSITMSIRKLRESLI-----SIPPSP-FHKRVFLFS 248

Query: 250 FKI-RFVRHHCLYNILILYLL-FRVNLLWRES 339
            +  ++  HH  Y   + YLL +R +L   ES
Sbjct: 249 VRFSQYFNHHQTYIPSVNYLLQYRAHLKLDES 280


>UniRef50_Q2WEC5 Cluster: ATP-binding cassette transporter
           sub-family A; n=1; Pecten maximus|Rep: ATP-binding
           cassette transporter sub-family A - Pecten maximus (King
           scallop) (Pilgrim's clam)
          Length = 1721

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -1

Query: 203 DPSLCYRYFSFISQTPIGFCYTFSELFSWFSVGALAREVSLRFFVYI-YIFLCN 45
           DPSL + +    S + I FC+  S  F+  + GA A  + L F +Y  Y FL N
Sbjct: 317 DPSLVFVFLICYSSSIISFCFMMSTFFNKANTGANAGGI-LYFLLYFPYFFLTN 369


>UniRef50_O44439 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 468

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 20/57 (35%), Positives = 26/57 (45%)
 Frame = -2

Query: 199 LLFAIDIFHLFLKRQLVFVILFPNYFPGFPSVHSRVRSL*GFSFIYIFFYVTEPRPI 29
           ++F ID   +FL   +V    F  YFP F  V     S     FIY  +Y T+  PI
Sbjct: 398 VVFEIDFLPIFLVANIVIFHSFYLYFPRFFQVSHNFSSF-SVLFIYCIYYPTKKCPI 453


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,704,350
Number of Sequences: 1657284
Number of extensions: 10093284
Number of successful extensions: 21675
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21661
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)