Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J18
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   0.95 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    24   0.95 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    24   0.95 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.3  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   5.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.1  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 162 NANWFLLYFFRIIFLVF 112
           N  W  LYF  IIFL F
Sbjct: 230 NTFWSALYFLTIIFLFF 246


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -1

Query: 101 LAREVSLRFFVYIYIFL 51
           L R VS++FFVY+ +++
Sbjct: 131 LLRNVSVQFFVYVILYI 147



 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 143 NKNQLAFEK*MKNIDSKEKGLAQNLREFIREFIYLYL 253
           N N    ++ +KN DS E  L +N+   ++ F+Y+ L
Sbjct: 111 NNNLQYIDEVLKNRDSHETNLLRNVS--VQFFVYVIL 145


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -1

Query: 101 LAREVSLRFFVYIYIFL 51
           L R VS++FFVY+ +++
Sbjct: 131 LLRNVSVQFFVYVILYI 147



 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 143 NKNQLAFEK*MKNIDSKEKGLAQNLREFIREFIYLYL 253
           N N    ++ +KN DS E  L +N+   ++ F+Y+ L
Sbjct: 111 NNNLQYIDEVLKNRDSHETNLLRNVS--VQFFVYVIL 145


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = +1

Query: 283 YNILILYLLFRVNLLWRESVFFVLCRNFVT 372
           YN+  +Y  + V++ +   + F+LC  + T
Sbjct: 51  YNLRRIYYFYCVSITFNVHLLFLLCSGYFT 80



 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = +1

Query: 277 CLYNILILYLLFRVNLLWRESVFFVLC 357
           C+Y     +++F ++LL+   +  +LC
Sbjct: 211 CIYYFYSAFIIFTIHLLFYCVLIILLC 237



 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 277 CLYNILILYLLFRVNLLWRESVFF 348
           C+Y     ++LF V+LL    +++
Sbjct: 237 CIYYFYYAFILFTVHLLLLVCIYY 260


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +2

Query: 29  DRPWLCYIKKYIYKRKTSKRPHARVH 106
           +RP+ C + K  +   ++   H R+H
Sbjct: 75  ERPYRCRLCKKAFSDSSTLTKHLRIH 100


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +2

Query: 29  DRPWLCYIKKYIYKRKTSKRPHARVH 106
           +RP+ C + K  +   ++   H R+H
Sbjct: 331 ERPYRCRLCKKAFSDSSTLTKHLRIH 356


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,877
Number of Sequences: 336
Number of extensions: 2759
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)