Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_J16
(490 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 226 2e-58
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 208 5e-53
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 199 2e-50
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 194 1e-48
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 194 1e-48
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 191 8e-48
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 124 1e-27
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 120 2e-26
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 119 4e-26
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 117 2e-25
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 111 6e-24
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 105 4e-22
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 103 2e-21
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 99 3e-20
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 60 3e-19
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 96 4e-19
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 78 1e-13
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 52 7e-06
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 42 0.006
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 40 0.039
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 38 0.091
UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1... 37 0.28
UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26; Epsilon... 36 0.37
UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellula... 36 0.37
UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021; ... 36 0.48
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 0.84
UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15; Bacteri... 35 1.1
UniRef50_Q62GL9 Cluster: 30S ribosomal protein S8; n=68; Bacteri... 34 1.5
UniRef50_Q6MJ26 Cluster: 30S ribosomal protein S8; n=1; Bdellovi... 33 2.6
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.4
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.4
UniRef50_A4JSK3 Cluster: Putative uncharacterized protein; n=1; ... 32 6.0
UniRef50_Q73NX9 Cluster: ISTde2, transposase; n=4; Bacteria|Rep:... 32 7.9
UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas d... 32 7.9
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 226 bits (553), Expect = 2e-58
Identities = 107/130 (82%), Positives = 116/130 (89%), Gaps = 1/130 (0%)
Frame = +2
Query: 71 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 250
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 251 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARXKH 427
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHE AR KH
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
Query: 428 LGRKNFRLLF 457
G K F
Sbjct: 121 TGGKILGFFF 130
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 208 bits (508), Expect = 5e-53
Identities = 100/130 (76%), Positives = 110/130 (84%), Gaps = 1/130 (0%)
Frame = +2
Query: 71 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 250
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 251 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARXKH 427
IVVNLTGRLNKCGVIS RFDV + D+++W NLLP RQFG++VLTT GI+DHE AR KH
Sbjct: 184 IVVNLTGRLNKCGVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARRKH 243
Query: 428 LGRKNFRLLF 457
G K F
Sbjct: 244 TGGKILGFFF 253
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 199 bits (486), Expect = 2e-50
Identities = 94/124 (75%), Positives = 108/124 (87%), Gaps = 1/124 (0%)
Frame = +2
Query: 71 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 250
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 251 IVVNLTGRLNKCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEXARXKH 427
IVV L GRLNKCGVISPRFDV + +IE WT LLPSRQFG++VLTTS GIMDHE AR K+
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
Query: 428 LGRK 439
+G K
Sbjct: 121 VGGK 124
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 194 bits (472), Expect = 1e-48
Identities = 95/141 (67%), Positives = 109/141 (77%), Gaps = 3/141 (2%)
Frame = +2
Query: 65 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 244
+ MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 245 GKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARX 421
GK+VVNLTGRLNKCGVISPRFDV + D+E+W NLLP+RQFG++VLTT GIMD E R
Sbjct: 157 GKMVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQ 216
Query: 422 KHLGRK--NFRLLFLSLLNTR 478
KH G + F L F N +
Sbjct: 217 KHTGGEILGFFLSFFFFFNVK 237
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 194 bits (472), Expect = 1e-48
Identities = 92/117 (78%), Positives = 102/117 (87%), Gaps = 1/117 (0%)
Frame = +2
Query: 92 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 271
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Query: 272 RLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARXKHLGRK 439
RLNKCGVI+ RFDV D+E+W NL PS QFG++VLTTS GIMDHE AR KH G +
Sbjct: 234 RLNKCGVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQKHTGSR 290
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 191 bits (465), Expect = 8e-48
Identities = 92/130 (70%), Positives = 106/130 (81%), Gaps = 1/130 (0%)
Frame = +2
Query: 71 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 250
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTVM KHGYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTVM-KHGYIGEFEITDDHRAGK 59
Query: 251 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARXKH 427
+VV LT RLNKCGVISPRF V + D+E+W NLLPS QFG+++LTTS GI D E AR KH
Sbjct: 60 MVVYLTDRLNKCGVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARRKH 119
Query: 428 LGRKNFRLLF 457
G K F
Sbjct: 120 TGGKILGFFF 129
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 124 bits (299), Expect = 1e-27
Identities = 59/122 (48%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Frame = +2
Query: 71 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 250
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 251 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARXKH 427
V L GR+NK G I PRF V +++ E+W LP+ +FG L+++TS G+M H+ A K
Sbjct: 61 YRVQLLGRINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKG 120
Query: 428 LG 433
+G
Sbjct: 121 IG 122
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 120 bits (288), Expect = 2e-26
Identities = 59/122 (48%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Frame = +2
Query: 71 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 250
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60
Query: 251 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARXKH 427
V L GR+NKCG I PR+ V ERW LP++ FG L+LTTS G+M AR K
Sbjct: 61 YSVTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKK 120
Query: 428 LG 433
+G
Sbjct: 121 IG 122
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 119 bits (286), Expect = 4e-26
Identities = 55/117 (47%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
Frame = +2
Query: 86 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 265
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 266 TGRLNKCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEXARXKHLG 433
GR+N C ++ R DV +IE++T LP+RQ+GY+V+TT GI+DHE A +++G
Sbjct: 65 QGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVG 121
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 117 bits (281), Expect = 2e-25
Identities = 56/125 (44%), Positives = 81/125 (64%), Gaps = 4/125 (3%)
Frame = +2
Query: 71 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 250
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 251 IVVNLTGRLNKCGVISPRFDVPINDIERWTN----LLPSRQFGYLVLTTSGGIMDHEXAR 418
I+V L GR+NKCG ISPR+ + N + R + LPS++ G ++++T G+M H
Sbjct: 61 IIVQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGI 120
Query: 419 XKHLG 433
+ +G
Sbjct: 121 REKIG 125
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 111 bits (268), Expect = 6e-24
Identities = 52/118 (44%), Positives = 82/118 (69%), Gaps = 1/118 (0%)
Frame = +2
Query: 89 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 268
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F + D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 269 GRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARXKHLGRK 439
GRLN+CG ISP + V + IE + T LLP+RQFG+++ TS GI+DH+ +++G K
Sbjct: 65 GRLNRCGAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKECLTENVGGK 122
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 105 bits (253), Expect = 4e-22
Identities = 50/119 (42%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
Frame = +2
Query: 80 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 259
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 260 NLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARXKHLG 433
L+G +N CG I PRF + + E + LP+R FG L+++T+ G+M + AR + LG
Sbjct: 63 ELSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLG 121
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 103 bits (248), Expect = 2e-21
Identities = 50/118 (42%), Positives = 75/118 (63%), Gaps = 1/118 (0%)
Frame = +2
Query: 89 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 268
L+D + +I NA + GK +V+I P S +I + L VM + YI FE++++ R GK V L+
Sbjct: 6 LNDVINTIKNASRIGKSEVIIGPASVMIGRILKVMQDYNYIKSFEVIEEERGGKFRVELS 65
Query: 269 GRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARXKHLGRK 439
+N CGVI PR V ++IER+ + LP++ FG ++LTT+ GIM H AR +G K
Sbjct: 66 DTINNCGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIGGK 123
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 99 bits (238), Expect = 3e-20
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Frame = +2
Query: 65 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 244
L M + ++AL + NAE G + P S +I L V+ GY+ FE VDD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 245 GKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARX 421
GK V L G +N+CG + PR+ ++ E+W LP+R +G L++TTS G+M H AR
Sbjct: 76 GKFEVELKGAINECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEARE 135
Query: 422 KHLG 433
+ +G
Sbjct: 136 EGIG 139
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 60.1 bits (139), Expect(2) = 3e-19
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +2
Query: 203 GYIGEFEIVDDHRAGKIVVNLTGRLNKCGVI 295
GYI EFE +DDHRAGKIVV L GR+NKCGVI
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINKCGVI 137
Score = 57.2 bits (132), Expect(2) = 3e-19
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +2
Query: 65 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 202
++ V + + +S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 95.9 bits (228), Expect = 4e-19
Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Frame = +2
Query: 71 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 250
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
Query: 251 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARXKH 427
V+L ++ KCG ISPRF V + W LPS G LV+TT+ G+M H A +
Sbjct: 61 FSVHLLAKITKCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAERG 120
Query: 428 LG 433
+G
Sbjct: 121 IG 122
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 77.8 bits (183), Expect = 1e-13
Identities = 35/118 (29%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Frame = +2
Query: 83 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 262
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R I +
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIE 63
Query: 263 LTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARXKHLG 433
L+ N+ I PRF V +++E++ LP+ FG L+L+TS G++ + A+ + +G
Sbjct: 64 LSEYFNEANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKIG 121
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 52.0 bits (119), Expect = 7e-06
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +2
Query: 179 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIER 334
F+TV MK G+FEIVD+ G+I V+L G LNK GVI FDV + D+E+
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNKYGVIGLGFDVQLGDLEK 51
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa|Rep:
Os01g0153200 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1139
Score = 42.3 bits (95), Expect = 0.006
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +2
Query: 227 VDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDI 328
VDDH++G+I++ GRLNK GVIS R DV + +
Sbjct: 912 VDDHKSGEIILEFDGRLNKWGVISFRSDVKVKKL 945
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 39.5 bits (88), Expect = 0.039
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +2
Query: 209 IGEFEIVDDHRAGKIVVNLTGRLNK 283
IG+FE++DDHRAGKIV NL+ ++ +
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQ 33
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 38.3 bits (85), Expect = 0.091
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Frame = +2
Query: 89 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF-EIVDDHRAGKIVVNL 265
++D L + N + G +V+ PCSKV++ L ++++ GYI F E V K++
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESFTEEVRGDSGIKVLKVF 65
Query: 266 TGRLNKCGVISP--RFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEXARXKHLG 433
N I R P + + +P G +++TS GIM AR +G
Sbjct: 66 LKYFNSAAAIRKIVRVSRPGKRVYSSADKMPRFYNALGIYIVSTSKGIMLDSHARNAGVG 125
>UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1;
Acanthamoeba castellanii|Rep: Mitochondrial ribosomal
protein S8 - Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 36.7 bits (81), Expect = 0.28
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Frame = +2
Query: 80 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV- 256
M++LS+ + + QV+++ SK+ + L+V+ K GYI F I D ++
Sbjct: 1 MSLLSNMISIVKVGYNARHLQVIVQN-SKLCINVLSVLYKLGYIRGFIIKDQKNITILLK 59
Query: 257 -VNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEXARXKHLG 433
+N + VIS ++ L + G+L+L+TS GI+ E + +G
Sbjct: 60 YINNKPAVRNIAVISTPGRRTYLKHKKLEKFLTKKDSGFLILSTSKGILTDEESNMFKIG 119
>UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26;
Epsilonproteobacteria|Rep: 30S ribosomal protein S8 -
Wolinella succinogenes
Length = 131
Score = 36.3 bits (80), Expect = 0.37
Identities = 31/123 (25%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Frame = +2
Query: 83 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 262
++++D+L I NA R + +K++V L V + G+I ++++D + GK +N
Sbjct: 4 DIIADSLTRIRNAAMRRLDYTTLY-YAKIVVSILEVFLAKGFIESYKVID--KDGKQSIN 60
Query: 263 LTGRLNKCG--VIS--PRFDVPINDIERWTNLLPSRQFGY--LVLTTSGGIMDHEXARXK 424
+ + ++ G VIS R + + + L + GY +V++TS G++ +E A
Sbjct: 61 VVLKYDEKGRSVISEIKRISKSGRRVYKGRDELKRFKNGYGTIVVSTSKGVIGNEEAYKA 120
Query: 425 HLG 433
++G
Sbjct: 121 NVG 123
>UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellular
organisms|Rep: 30S ribosomal protein S8 - Bacillus
anthracis
Length = 132
Score = 36.3 bits (80), Expect = 0.37
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Frame = +2
Query: 71 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 250
MV + ++D L I NA + + L P SK+ + ++ + G+I + E ++D++ G
Sbjct: 1 MVMTDPIADMLTRIRNANMV-RHEKLEVPASKIKKEIAELLKREGFIRDVEYIEDNKQGI 59
Query: 251 IVVNLTGRLNKCGVIS--PRFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEXAR 418
+ + L N VI+ R P + + +P G +++TS G+M + AR
Sbjct: 60 LRIFLKYGANNERVITGLKRISKPGLRVYAKADEVPRVLNGLGIALVSTSKGVMTDKDAR 119
Query: 419 XKHLG 433
G
Sbjct: 120 QLQTG 124
>UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 90.t00021 - Entamoeba histolytica HM-1:IMSS
Length = 627
Score = 35.9 bits (79), Expect = 0.48
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 236 HRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 388
H G I ++L RLN+ GV+ + + +I + LL FGYL +T+S
Sbjct: 192 HEIGNIHISLLNRLNQIGVVIGIYSNMLEEIPEYVTLL--HHFGYLTITSS 240
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 0.84
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 83 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 226
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15;
Bacteria|Rep: 30S ribosomal protein S8 - Bacteroides
thetaiotaomicron
Length = 131
Score = 34.7 bits (76), Expect = 1.1
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Frame = +2
Query: 89 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 268
++D L + NA K +V+ P S + + ++ + GYI ++ V+D G I V L
Sbjct: 5 IADYLTRLRNAIG-AKHRVVEVPASNLKKEITKILFEKGYILNYKFVEDGPQGTIKVALK 63
Query: 269 -GRLNKCGVISPRFDVPINDIERWTNL--LPS--RQFGYLVLTTSGGIMDHEXARXKHLG 433
+NK I V + ++T +P G +++TS G+M ++ A +G
Sbjct: 64 YDSVNKVNAIKKLERVSSPGMRKYTGYKDMPRVINGLGIAIISTSKGVMTNKEAAELKIG 123
>UniRef50_Q62GL9 Cluster: 30S ribosomal protein S8; n=68;
Bacteria|Rep: 30S ribosomal protein S8 - Burkholderia
mallei (Pseudomonas mallei)
Length = 131
Score = 34.3 bits (75), Expect = 1.5
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Frame = +2
Query: 89 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 268
++D L I NA+ K V + P SKV V V+ GYI +F + D ++ + L
Sbjct: 7 IADMLTRIRNAQMVEKVSVSM-PSSKVKVAIAQVLKDEGYIDDFAVKADGAKAELNIALK 65
Query: 269 GRLNKCGVIS--PRFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEXARXKHLG 433
+ VI R P + R N +P G +++T G+M AR +G
Sbjct: 66 YYAGR-PVIERLERVSKPGLRVYRGRNEIPQVMNGLGVAIVSTPKGVMTDRKARATGVG 123
>UniRef50_Q6MJ26 Cluster: 30S ribosomal protein S8; n=1;
Bdellovibrio bacteriovorus|Rep: 30S ribosomal protein S8
- Bdellovibrio bacteriovorus
Length = 129
Score = 33.5 bits (73), Expect = 2.6
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Frame = +2
Query: 80 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 259
M+ +S L I NA K + + P SKV +++ G+I F++ D + G + V
Sbjct: 1 MDTISQFLTMIRNAGA-AKHEKVDMPASKVRAGIAQILVNEGFIRSFKVAKDSKQGIMRV 59
Query: 260 NLTGRLNKCG--VIS--PRFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEXARX 421
L + ++ G I+ R P + ++ +P+ + G +++TS GIM + A
Sbjct: 60 YL--KYDEAGGHAINNIDRVSRPGRRVYVKSDKIPTVRSGMGMSIISTSKGIMSGKQATE 117
Query: 422 KHLG 433
+ LG
Sbjct: 118 QKLG 121
>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
Pectobacterium atrosepticum|Rep: Putative
uncharacterized protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 860
Score = 33.1 bits (72), Expect = 3.4
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -3
Query: 146 GLVFSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRID 30
G + SLA Y H SY W RFSS FV+N ID
Sbjct: 347 GKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVID 385
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 33.1 bits (72), Expect = 3.4
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 74 VRMN-VLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 244
+RMN ++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_A4JSK3 Cluster: Putative uncharacterized protein; n=1;
Burkholderia vietnamiensis G4|Rep: Putative
uncharacterized protein - Burkholderia vietnamiensis
(strain G4 / LMG 22486) (Burkholderiacepacia (strain
R1808))
Length = 154
Score = 32.3 bits (70), Expect = 6.0
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -2
Query: 444 KFFLPRCFXLAXSWSMMPPLVVRTR*PNCREGSRLVHLSISLMGT-SKRGEMTPHLFSLP 268
++F R LA S PPL + P CRE RL + + L+ T + E ++++LP
Sbjct: 6 EYFAQRTSPLALSMWAHPPLALGPDGPVCREPYRLPYPGVELVYTPGETVERDGNIYTLP 65
Query: 267 VRF 259
R+
Sbjct: 66 ARY 68
>UniRef50_Q73NX9 Cluster: ISTde2, transposase; n=4; Bacteria|Rep:
ISTde2, transposase - Treponema denticola
Length = 358
Score = 31.9 bits (69), Expect = 7.9
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = +2
Query: 158 CSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW 337
C K K T H Y +E + A K++ + K IS D+ I +E W
Sbjct: 284 CLKEGEKRTTCYYAHPY-SSWERGSNENANKLIRRF---IPKGADISKYSDIQIKQVENW 339
Query: 338 TNLLPSRQFGY 370
N P R FGY
Sbjct: 340 INNYPRRMFGY 350
>UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas
danica|Rep: Ribosomal protein S8 - Ochromonas danica
Length = 128
Score = 31.9 bits (69), Expect = 7.9
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Frame = +2
Query: 89 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 268
L D L S+ NA K V I+ S++I K+L ++ K G I F D +VNL
Sbjct: 5 LIDFLLSLKNASLAKKDFVKIKE-SRLISKYLPILYKEGIIQSFFKKQDSCNSFYIVNLR 63
Query: 269 GRLNKCGVISPR-FDVP--INDIERWTNLLPSRQFGYLVLTTSGGIMDH 406
NK + P I I R + + L+L+T GIM H
Sbjct: 64 HFQNKVVTQDIQLISTPSKIKKISRKELISLHLKNKMLILSTPKGIMSH 112
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,907,729
Number of Sequences: 1657284
Number of extensions: 7606464
Number of successful extensions: 15568
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 15314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15548
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -