Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_J15
(640 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 204 5e-53
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 198 3e-51
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 195 3e-50
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 191 3e-49
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 101 6e-22
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 56 2e-08
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 7.2
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 27 9.5
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 204 bits (498), Expect = 5e-53
Identities = 95/170 (55%), Positives = 124/170 (72%), Gaps = 2/170 (1%)
Frame = +1
Query: 103 DVFFEEKFPDDSWESNWVYSEHPXKE--FGKFKLTAGKFFSDPXDDKGLKTSEDARFYAL 276
+VFF+EKF +D WES WV SE E G++ T+GK+ DP +DKG++TSED RFYA+
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDP-EDKGIQTSEDYRFYAI 87
Query: 277 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGETPYEIMFGPDIC 456
S ++ FSN+ K LV+QF+VKHEQ +DCGGGY+K+ ++ K G+TPY IMFGPDIC
Sbjct: 88 SAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDIC 147
Query: 457 GPXTXKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLID 606
G T KVH IF+ KNHLIKKD+ C+ D +H+YTLI+ PD TY +LID
Sbjct: 148 GYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILID 197
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 198 bits (483), Expect = 3e-51
Identities = 88/172 (51%), Positives = 125/172 (72%), Gaps = 2/172 (1%)
Frame = +1
Query: 103 DVFFEEKFPDDSWESNWVYSEHPXKE--FGKFKLTAGKFFSDPXDDKGLKTSEDARFYAL 276
+V FEE+F +D WES WV S+ E G FK TAG++ DP DDKG++T+ DAR +A+
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP-DDKGIQTTLDARHFAI 85
Query: 277 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGETPYEIMFGPDIC 456
S K FSN+G+ LV+Q+++K EQDI+CGGGY+K+ + K G+TPY +MFGPDIC
Sbjct: 86 SAKIPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGPDIC 145
Query: 457 GPXTXKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDMR 612
G T K+H+I SY+G+N+ IKKD++C+ D TH+YT I++PD +Y +L+D R
Sbjct: 146 GTQTKKLHLILSYQGQNYPIKKDLQCETDKLTHVYTFILRPDASYSILVDNR 197
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 195 bits (475), Expect = 3e-50
Identities = 96/181 (53%), Positives = 123/181 (67%), Gaps = 13/181 (7%)
Frame = +1
Query: 103 DVFFEEKFPDDSWESNWVYSEHPXKE--FGKFKLTAGKFFSDPXDDKGL----------- 243
+VFF+EKF DD WE WV SE + G++ T+GK++ D DDKG+
Sbjct: 26 EVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDA-DDKGMCEVTLLLCAGI 83
Query: 244 KTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGET 423
+TSED RFYA+S K+ FS++ K LV+QF+VKHEQ +DCGGGY+K+ ++ K GET
Sbjct: 84 QTSEDYRFYAISAKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGET 143
Query: 424 PYEIMFGPDICGPXTXKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLI 603
PY IMFGPDICG T KVH I + GKNHLIKKD+ CK D TH+YTLI++PD Y +LI
Sbjct: 144 PYSIMFGPDICGYATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTLIIRPDAKYSILI 203
Query: 604 D 606
D
Sbjct: 204 D 204
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 191 bits (466), Expect = 3e-49
Identities = 86/175 (49%), Positives = 122/175 (69%), Gaps = 2/175 (1%)
Frame = +1
Query: 94 INCDVFFEEKFPDDSWESNWVYSEHPXKE--FGKFKLTAGKFFSDPXDDKGLKTSEDARF 267
++ +V FEE+F DD W S WV S+ E G FK TAG + DP DD+G++T+ DA+
Sbjct: 25 VSGEVIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP-DDRGIQTTSDAKH 82
Query: 268 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGETPYEIMFGP 447
+A+S KF FSN+ + LVVQ+++K EQDI+CGG Y+K+ + K G+TPY MFGP
Sbjct: 83 FAISAKFPEFSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGP 142
Query: 448 DICGPXTXKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDMR 612
DICG T K+H+I SY+G+N+ IKKD++C+ D TH YT I++PD +Y +L+D R
Sbjct: 143 DICGDQTKKLHLILSYQGQNYPIKKDLKCETDKLTHFYTFILRPDASYSLLVDNR 197
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 101 bits (241), Expect = 6e-22
Identities = 68/178 (38%), Positives = 95/178 (53%), Gaps = 10/178 (5%)
Frame = +1
Query: 103 DVFFEEKFPDDSWESNWVYSEHPXKEFGKFKLTAGKFFSDPXDDKGLKTSEDARFYALSR 282
D F E F D+S+E WV S + G +K SD +D GL SE A+ YA+ +
Sbjct: 24 DPLFYEPF-DESFEGRWVLSGKDDYK-GVWKHEK----SDGHEDYGLLVSEKAKKYAIIK 77
Query: 283 KF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEXKDMHGETPYEIMFGPD 450
+ +P + + +V+QF V+ + ++CGG YLK D + K+ ETPY IMFGPD
Sbjct: 78 ELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGPD 137
Query: 451 ICGPXTXKVHVIFSYK----GK--NHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLID 606
CG T KVH I +K GK H +K D +H+YT I+KPDN +L+D
Sbjct: 138 KCG-STNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVD 194
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 56.4 bits (130), Expect = 2e-08
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1
Query: 499 GKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLID 606
G NHLIKKD+ C+ D TH+YTLI++PD Y +LID
Sbjct: 515 GNNHLIKKDVPCETDQLTHVYTLIIRPDAKYSILID 550
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -3
Query: 452 MSGPNIISYGVSPCMSXCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGL 309
M GP ++ ++P S +Q + +++ +SC+CL T+KGL
Sbjct: 674 MLGPTVLV--LAPTRELASQIQDEAVKFGRSSRVSCTCL-YGGTSKGL 718
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 278 PVSSNRSVMRVNPWSSSSLSNMNKTLTVEADTSRSLTANWSXRTCT 415
P+SS+ S+M NP S ++ + LTV A ++ S +++ S + T
Sbjct: 5 PISSSLSLMASNPIPSPPVAKPGRPLTVAACSNSSSSSSSSSPSST 50
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,124,170
Number of Sequences: 37544
Number of extensions: 352610
Number of successful extensions: 888
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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