Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_J15
(640 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to SP|Q... 198 2e-51
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 198 3e-51
At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to simi... 184 4e-47
At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to simi... 107 6e-24
At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin... 89 3e-18
At5g07340.1 68418.m00838 calnexin, putative identical to calnexi... 82 3e-16
At1g74170.1 68414.m08590 leucine-rich repeat family protein cont... 30 1.5
At1g74190.1 68414.m08592 leucine-rich repeat family protein cont... 29 2.6
At5g10920.1 68418.m01267 argininosuccinate lyase, putative / arg... 29 3.4
>At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to
SP|Q38858 Calreticulin 2 precursor {Arabidopsis
thaliana}
Length = 424
Score = 198 bits (484), Expect = 2e-51
Identities = 93/169 (55%), Positives = 119/169 (70%), Gaps = 2/169 (1%)
Frame = +1
Query: 106 VFFEEKFPDDSWESNWVYSEHPXKE--FGKFKLTAGKFFSDPXDDKGLKTSEDARFYALS 279
V FEE+F DD WE+ WV SE + G++K TAG + D +DKG++TSED RFYA+S
Sbjct: 24 VIFEERF-DDGWENRWVKSEWKKDDNTAGEWKHTAGNWSGDA-NDKGIQTSEDYRFYAIS 81
Query: 280 RKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGETPYEIMFGPDICG 459
+F FSN+ K LV QF+VKHEQ +DCGGGY+K+ ++ K G+TPY IMFGPDICG
Sbjct: 82 AEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICG 141
Query: 460 PXTXKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLID 606
T KVH I +Y NHLIKKD+ C+ D TH+YT I++PD TY +LID
Sbjct: 142 YSTKKVHAILTYNEANHLIKKDVPCETDQLTHVYTFILRPDATYSILID 190
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 198 bits (482), Expect = 3e-51
Identities = 90/173 (52%), Positives = 121/173 (69%), Gaps = 2/173 (1%)
Frame = +1
Query: 94 INCDVFFEEKFPDDSWESNWVYSEHPXKE--FGKFKLTAGKFFSDPXDDKGLKTSEDARF 267
++ +V FEEKF +D WE WV S+ + G++K TAG + D +DKG++TSED RF
Sbjct: 20 VSAEVIFEEKF-EDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGDA-NDKGIQTSEDYRF 77
Query: 268 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGETPYEIMFGP 447
YA+S +F FSN+ K LV QF+VKHEQ +DCGGGY+K+ ++ G+TPY IMFGP
Sbjct: 78 YAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSDDVDQTKFGGDTPYSIMFGP 137
Query: 448 DICGPXTXKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLID 606
DICG T KVH I +Y G NHLIKK++ C+ D TH+YT +++PD TY +LID
Sbjct: 138 DICGYSTKKVHAILTYNGTNHLIKKEVPCETDQLTHVYTFVLRPDATYSILID 190
>At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 424
Score = 184 bits (448), Expect = 4e-47
Identities = 85/170 (50%), Positives = 117/170 (68%), Gaps = 2/170 (1%)
Frame = +1
Query: 103 DVFFEEKFPDDSWESNWVYSEHPXKE--FGKFKLTAGKFFSDPXDDKGLKTSEDARFYAL 276
++F EE F + W+S WV S+ E G FK TAGK+ DP D+KG++T DA+ YA+
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDP-DNKGIQTYNDAKHYAI 86
Query: 277 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGETPYEIMFGPDIC 456
S K FSN+ + LVVQ++VK EQDI+CGG Y+K+ + K G+TPY +MFGPDIC
Sbjct: 87 SAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSLMFGPDIC 146
Query: 457 GPXTXKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLID 606
G T K+HVI SY+G+N+ IKKD++C+ D H YT I++PD +Y VL+D
Sbjct: 147 GTQTKKLHVIVSYQGQNYPIKKDLQCETDKLNHFYTFILRPDASYSVLVD 196
>At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 370
Score = 107 bits (257), Expect = 6e-24
Identities = 52/114 (45%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
Frame = +1
Query: 103 DVFFEEKFPDDSWESNWVYSEHPXKE--FGKFKLTAGKFFSDPXDDKGLKTSEDARFYAL 276
++F EE F + W+S WV S+ E G FK TAGK+ DP D+KG++T DA+ YA+
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDP-DNKGIQTYNDAKHYAI 86
Query: 277 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGETPYEIM 438
S K FSN+ + LVVQ++VK EQDI+CGG Y+K+ + K G+TPY ++
Sbjct: 87 SAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSVL 140
>At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin
homolog 1, Arabidopsis thaliana, EMBL:AT08315
[SP|P29402]
Length = 530
Score = 88.6 bits (210), Expect = 3e-18
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 10/169 (5%)
Frame = +1
Query: 130 DDSWESNWVYSEHPXKEFGKFKLTAGKFFSDPXDDKGLKTSEDARFYALSRKF-KPFSNE 306
D+ ++ W+ S++ E G +K S+ +D GL SE AR Y + ++ +P + +
Sbjct: 36 DEPFDGRWIVSKNSDYE-GVWKHAK----SEGHEDYGLLVSEKARKYGIVKELDEPLNLK 90
Query: 307 GKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEXKDMHGETPYEIMFGPDICGPXTXKV 477
+V+Q+ V+ ++ ++CGG YLK + + E+PY IMFGPD CG T KV
Sbjct: 91 EGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESPYSIMFGPDKCG-GTNKV 149
Query: 478 HVIFSYKGK------NHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLID 606
H I +K H +K D +H+YT I+KPDN +L+D
Sbjct: 150 HFILKHKNPKSGEYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVD 198
>At5g07340.1 68418.m00838 calnexin, putative identical to calnexin
homolog 2 from Arabidopsis thaliana [SP|Q38798], strong
similarity to calnexin homolog 1, Arabidopsis thaliana,
EMBL:AT08315 [SP|P29402]; contains Pfam profile PF00262
calreticulin family
Length = 532
Score = 81.8 bits (193), Expect = 3e-16
Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 13/172 (7%)
Frame = +1
Query: 130 DDSWESNWVYSEHPXKEFGKFKLTAGKFFSDPXDDKGLKTSEDARFYALSRKF---KPFS 300
D+ ++ WV SE + G +K S+ DD GL SE A+ Y + ++ +P +
Sbjct: 36 DEPFDGRWVVSEKAEYQ-GVWKHEK----SEGHDDYGLLVSEKAKKYGIVKELDVDEPLN 90
Query: 301 -NEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEXKDMHGETPYEIMFGPDICGPXT 468
NEG +V+Q+ + ++ ++CGG YLK + + ++PY IMFGPD CG T
Sbjct: 91 LNEGT-VVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQGFDNDSPYSIMFGPDKCG-AT 148
Query: 469 XKVHVIFSYKGK------NHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLID 606
KVH I +K H +K D+ +H+YT ++K DN +L+D
Sbjct: 149 NKVHFILKHKNPKSGEFVEHHLKFPPSVPFDMLSHVYTAVLKSDNEVRILVD 200
>At1g74170.1 68414.m08590 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1068
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 322 VQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGETPYEI 435
++F KH D GG +F L ++ GE P E+
Sbjct: 830 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVEL 867
>At1g74190.1 68414.m08592 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.1
[Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
Length = 965
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 322 VQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGETPYE 432
++F KH D GG +F L ++ GE P E
Sbjct: 762 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVE 798
>At5g10920.1 68418.m01267 argininosuccinate lyase, putative /
arginosuccinase, putative similar to argininosuccinate
lyase [Nostoc punctiforme] GI:7672743; contains Pfam
profile PF00206: Lyase
Length = 517
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 368 DTSRSLTAN-WSXRTCTERLHMRLCSALTSVVXEPXR 475
D R + AN + RT E +HM + +ALT ++ EP +
Sbjct: 121 DIERQIEANKFEWRTDREDVHMNIEAALTDLIGEPAK 157
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,893,971
Number of Sequences: 28952
Number of extensions: 289860
Number of successful extensions: 777
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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