Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J14
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058551-1|AAL13780.1|  806|Drosophila melanogaster LD24714p pro...    30   3.1  
AE014134-539|AAF51161.1|  757|Drosophila melanogaster CG3542-PB,...    30   3.1  
AE014134-538|AAF51160.1|  806|Drosophila melanogaster CG3542-PA,...    30   3.1  
BT015285-1|AAT94514.1|  141|Drosophila melanogaster GH17517p pro...    29   7.2  

>AY058551-1|AAL13780.1|  806|Drosophila melanogaster LD24714p
           protein.
          Length = 806

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = +1

Query: 244 RRREKEAKMSKKH-LHNQAAIPLAPA 318
           +++EK AK  K+H  HN++  PL+PA
Sbjct: 744 KKKEKRAKKDKRHNRHNRSGTPLSPA 769


>AE014134-539|AAF51161.1|  757|Drosophila melanogaster CG3542-PB,
           isoform B protein.
          Length = 757

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = +1

Query: 244 RRREKEAKMSKKH-LHNQAAIPLAPA 318
           +++EK AK  K+H  HN++  PL+PA
Sbjct: 695 KKKEKRAKKDKRHNRHNRSGTPLSPA 720


>AE014134-538|AAF51160.1|  806|Drosophila melanogaster CG3542-PA,
           isoform A protein.
          Length = 806

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = +1

Query: 244 RRREKEAKMSKKH-LHNQAAIPLAPA 318
           +++EK AK  K+H  HN++  PL+PA
Sbjct: 744 KKKEKRAKKDKRHNRHNRSGTPLSPA 769


>BT015285-1|AAT94514.1|  141|Drosophila melanogaster GH17517p
           protein.
          Length = 141

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +2

Query: 41  SHYQLDRNTGTTYTCWRVRLFIISNFTTKLTPKHRKVIFSN 163
           SHYQ    TG   +CW     IISN   K+   H ++ FS+
Sbjct: 49  SHYQRTLITGCPCSCW----VIISNLCYKIAILHFRLCFSH 85


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,759,831
Number of Sequences: 53049
Number of extensions: 555604
Number of successful extensions: 1716
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1711
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)