Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J14
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22176-1|CAA80142.1|  724|Caenorhabditis elegans Hypothetical pr...    31   0.94 
U37532-1|AAC05308.1|  438|Caenorhabditis elegans HMG-box protein...    31   0.94 
AL032655-1|CAA21726.1|  995|Caenorhabditis elegans Hypothetical ...    31   0.94 
AF043703-1|AAK21504.1|  437|Caenorhabditis elegans Posterior pha...    31   0.94 
U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein...    28   5.0  
AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or cys...    28   5.0  
Z73974-1|CAA98270.2|  349|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U58742-1|AAB36857.2|  170|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z22176-1|CAA80142.1|  724|Caenorhabditis elegans Hypothetical
           protein ZK1098.1 protein.
          Length = 724

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 18/54 (33%), Positives = 30/54 (55%)
 Frame = +1

Query: 121 NKVNSETSKSDIFE**NQRKQSKRSDKRDFHFAKTLSQI*TRRREKEAKMSKKH 282
           N  +  T+ S+I E   ++K  K+ +KR  + +++  +I    REKE K  KKH
Sbjct: 631 NGTSGTTAGSEILEKKKKKKDKKKKNKRSDNNSESEGEI----REKEKKKKKKH 680


>U37532-1|AAC05308.1|  438|Caenorhabditis elegans HMG-box protein
           protein.
          Length = 438

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 153 YFRIIKSTKTIKTERQTRFSFCENFIANLNEAKRKRGKNV 272
           YF + K  K    ER   +S  EN+  N  + K++R K++
Sbjct: 243 YFEMAKKDKETHKERYPEWSARENYAVNKKKTKKRRDKSI 282


>AL032655-1|CAA21726.1|  995|Caenorhabditis elegans Hypothetical
           protein Y6B3B.3 protein.
          Length = 995

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 19/45 (42%), Positives = 27/45 (60%)
 Frame = -1

Query: 366 GIIFGYHGPQLGLLKDRRC*RYRRLIVKVFFRHFCLFFSSPRLNL 232
           G+  GYH     LLKD +   + R+I++VFF HF  FFS   ++L
Sbjct: 157 GLWNGYHDFS-NLLKDIKNKFFLRIILRVFF-HFTCFFSHAGMSL 199


>AF043703-1|AAK21504.1|  437|Caenorhabditis elegans Posterior
           pharynx defect protein 1 protein.
          Length = 437

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 153 YFRIIKSTKTIKTERQTRFSFCENFIANLNEAKRKRGKNV 272
           YF + K  K    ER   +S  EN+  N  + K++R K++
Sbjct: 242 YFEMAKKDKETHKERYPEWSARENYAVNKKKTKKRRDKSI 281


>U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein 6
           protein.
          Length = 375

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +2

Query: 107 ISNFTTKLTPKHRKVIFSNNKINENNQNGATNEIFILRKLYRKFKRGEEKKRQ 265
           I+NF ++ T  H K I + + I+E      TN  +       KFK+    KR+
Sbjct: 138 INNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKRE 190


>AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 375

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +2

Query: 107 ISNFTTKLTPKHRKVIFSNNKINENNQNGATNEIFILRKLYRKFKRGEEKKRQ 265
           I+NF ++ T  H K I + + I+E      TN  +       KFK+    KR+
Sbjct: 138 INNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKRE 190


>Z73974-1|CAA98270.2|  349|Caenorhabditis elegans Hypothetical
           protein F29F11.3 protein.
          Length = 349

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +3

Query: 549 CNEK-ACSSALYHCSVPQHCNDFG 617
           C +K ACS  +  C VP H +D G
Sbjct: 186 CLQKIACSMGILKCMVPDHADDLG 209


>U58742-1|AAB36857.2|  170|Caenorhabditis elegans Hypothetical
           protein F31A3.3 protein.
          Length = 170

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 155 FSNNKINENNQNGATNEIFILRKLYRK 235
           F+N K + NNQ  A N++ + + + RK
Sbjct: 15  FNNRKSSNNNQENAVNQMVVKKPIKRK 41


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,532,659
Number of Sequences: 27780
Number of extensions: 295968
Number of successful extensions: 916
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)