Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_J13
(558 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11; Ditrys... 130 3e-29
UniRef50_Q1EQM4 Cluster: Putative conjugal transfer protein; n=1... 43 0.004
UniRef50_Q1HTS1 Cluster: S1L; n=1; Squirrelpox virus|Rep: S1L - ... 37 0.37
UniRef50_P11046 Cluster: Laminin subunit beta-1 precursor; n=6; ... 36 0.48
UniRef50_UPI0000DC18C9 Cluster: UPI0000DC18C9 related cluster; n... 35 1.1
UniRef50_Q9F3G2 Cluster: Putative uncharacterized protein SCO453... 35 1.5
UniRef50_A5KDY1 Cluster: Putative uncharacterized protein; n=2; ... 35 1.5
UniRef50_Q1H1X4 Cluster: Methyl-accepting chemotaxis sensory tra... 34 2.0
UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;... 34 2.6
UniRef50_Q115P0 Cluster: Chromosome segregation ATPase-like prot... 34 2.6
UniRef50_A5HMP0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q15075 Cluster: Early endosome antigen 1; n=30; Euteleo... 34 2.6
UniRef50_A0Q371 Cluster: Methyl-accepting chemotaxis protein; n=... 33 3.4
UniRef50_A7RV18 Cluster: Predicted protein; n=3; Nematostella ve... 33 3.4
UniRef50_Q21004 Cluster: Putative uncharacterized protein amph-1... 33 4.5
UniRef50_UPI000023D1F1 Cluster: hypothetical protein FG05573.1; ... 33 6.0
UniRef50_Q3ERP6 Cluster: Phage-related protein; n=6; root|Rep: P... 33 6.0
UniRef50_Q4Q3I1 Cluster: Putative uncharacterized protein; n=3; ... 33 6.0
UniRef50_Q4D9W4 Cluster: Putative uncharacterized protein; n=2; ... 33 6.0
UniRef50_Q9Y8A0 Cluster: Differentiation-related protein Infp; n... 33 6.0
UniRef50_O34894 Cluster: Septation ring formation regulator ezrA... 33 6.0
UniRef50_UPI0000E4830D Cluster: PREDICTED: similar to RNA-bindin... 32 7.9
UniRef50_Q8EMW1 Cluster: Methyl-accepting chemotaxis protein; n=... 32 7.9
UniRef50_Q15WP3 Cluster: Lipopolysaccharide biosynthesis; n=2; A... 32 7.9
UniRef50_Q22RN9 Cluster: Putative uncharacterized protein; n=1; ... 32 7.9
UniRef50_Q5JHN1 Cluster: DNA double-strand break repair rad50 AT... 32 7.9
UniRef50_O64299 Cluster: Exonuclease subunit 2; n=5; Viruses|Rep... 32 7.9
>UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11;
Ditrysia|Rep: Apolipophorin-3 precursor - Manduca sexta
(Tobacco hawkmoth) (Tobacco hornworm)
Length = 189
Score = 130 bits (313), Expect = 3e-29
Identities = 62/88 (70%), Positives = 71/88 (80%)
Frame = +2
Query: 290 ALGDANGKAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXHKLA 469
A+ DANGKA EALEQ+ QN+E+TAEELRKAHPDVEK A A ++KLQAAVQ TVQE KLA
Sbjct: 87 AISDANGKAKEALEQARQNVEKTAEELRKAHPDVEKEANAFKDKLQAAVQTTVQESQKLA 146
Query: 470 NXVXSNVXXTNEKLAPXIKAAYDDFAKN 553
V SN+ TN+KLAP IK AYDDF K+
Sbjct: 147 KEVASNMEETNKKLAPKIKQAYDDFVKH 174
Score = 107 bits (256), Expect = 2e-22
Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 4/85 (4%)
Frame = +1
Query: 43 MAAKFVV-LFACIALAQGAMVRRDAP---DFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQ 210
MAAKFVV L AC+AL+ AMVRRDAP + F+++E H KEF KT +QFNSL SK+ Q
Sbjct: 1 MAAKFVVVLAACVALSHSAMVRRDAPAGGNAFEEMEKHAKEFQKTFSEQFNSLVNSKNTQ 60
Query: 211 DFSKAWKDGSESVLQQLNAFAKSLQ 285
DF+KA KDGS+SVLQQL+AF+ SLQ
Sbjct: 61 DFNKALKDGSDSVLQQLSAFSSSLQ 85
>UniRef50_Q1EQM4 Cluster: Putative conjugal transfer protein; n=1;
Streptomyces kanamyceticus|Rep: Putative conjugal
transfer protein - Streptomyces kanamyceticus
Length = 1481
Score = 43.2 bits (97), Expect = 0.004
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +2
Query: 176 SLTRS-PSQRTHRTSARLGRTAXXXXXXXXXXXXRVSXAALGDANGKAXEALEQSXQNIE 352
S TRS P+ R A LG +A R + AA A G A A +++
Sbjct: 1206 SATRSEPAPTADRPYAHLGNSALRDAVRKAAIAARATTAAADKAEGAADRAEQEAAAGAG 1265
Query: 353 RTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXHKLANXVXSNVXXTNEKLA 514
+ L++ H DV + A A+RE L + T+ E N + + ++LA
Sbjct: 1266 PKSLALQRRHQDVAERAVAIREVL--LLDGTIAERTARLNGTEARIGGLEQQLA 1317
>UniRef50_Q1HTS1 Cluster: S1L; n=1; Squirrelpox virus|Rep: S1L -
Squirrelpox virus
Length = 1258
Score = 36.7 bits (81), Expect = 0.37
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 311 KAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQ 427
K + LEQ Q +E+ AE+L++ + D+EK A L +K Q
Sbjct: 889 KKADDLEQKTQELEKKAEDLKQKNQDLEKKADDLEQKTQ 927
>UniRef50_P11046 Cluster: Laminin subunit beta-1 precursor; n=6;
Diptera|Rep: Laminin subunit beta-1 precursor -
Drosophila melanogaster (Fruit fly)
Length = 1790
Score = 36.3 bits (80), Expect = 0.48
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +2
Query: 281 SXAALGDANGKAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXH 460
S AA ++ GKA +A++Q+ NIE ++L K + +A A V+ ++
Sbjct: 1602 SLAAADESQGKAKDAIQQANSNIELAGQDLEKIDEET-YSAEAPANNTAQQVEKLAKKVQ 1660
Query: 461 KLANXVXSN 487
KL N + N
Sbjct: 1661 KLQNNIMKN 1669
>UniRef50_UPI0000DC18C9 Cluster: UPI0000DC18C9 related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC18C9 UniRef100 entry -
Rattus norvegicus
Length = 1417
Score = 35.1 bits (77), Expect = 1.1
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +2
Query: 347 IERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXHKLANXVXSNVXXTNEKLAPXIK 526
+ EE++ H DV K A+ + Q A Q T + H + SNV N+KL+ +
Sbjct: 602 VRNLTEEVQSLHEDVSKLTRAV-QAAQEAQQQTQEHLH-IEEEKLSNVSKVNQKLSQQVD 659
Query: 527 AAYDDF 544
A DF
Sbjct: 660 ALEGDF 665
>UniRef50_Q9F3G2 Cluster: Putative uncharacterized protein SCO4538;
n=1; Streptomyces coelicolor|Rep: Putative
uncharacterized protein SCO4538 - Streptomyces
coelicolor
Length = 111
Score = 34.7 bits (76), Expect = 1.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 139 HHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFA 273
+HTK+ ++ + + + DF W+DG E + QQL+A A
Sbjct: 28 NHTKKLFESYKDDIGDGSVNDALDDFESNWEDGREDITQQLDALA 72
>UniRef50_A5KDY1 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 798
Score = 34.7 bits (76), Expect = 1.5
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 311 KAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXHKLAN 472
KA + +E++ +E+TA+++ K VEK A + EK V+ T + K A+
Sbjct: 525 KAADQVEKAADQVEKTADQVEKTADQVEKTADQV-EKTADQVEKTADQVEKAAD 577
>UniRef50_Q1H1X4 Cluster: Methyl-accepting chemotaxis sensory
transducer; n=1; Methylobacillus flagellatus KT|Rep:
Methyl-accepting chemotaxis sensory transducer -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 543
Score = 34.3 bits (75), Expect = 2.0
Identities = 25/92 (27%), Positives = 38/92 (41%)
Frame = +2
Query: 278 VSXAALGDANGKAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEX 457
V A L DA GKA +E N+ R EE+ A K A + +Q +QN +
Sbjct: 454 VEGARLSDAAGKALGEIENVTNNLARLIEEISSATEAQTKAAATVSMNMQ-QIQNITSQT 512
Query: 458 HKLANXVXSNVXXTNEKLAPXIKAAYDDFAKN 553
+ S++ LA ++A+ F N
Sbjct: 513 SEGTRKTASSIGQLT-SLAEELRASVAGFKLN 543
>UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;
n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 508
Score = 33.9 bits (74), Expect = 2.6
Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Frame = +3
Query: 6 ASPSALSLSTAHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFRTTV*L 185
ASP +A GR R+ +RL R GP GA RR +L G R+ G
Sbjct: 296 ASPPVPEGGSAPAGRAARARVRLPRGGP---GACRRKQLRSGPRSFPAGGRSAGPPRGSG 352
Query: 186 AHQVKGRTGLQQGLEGRLRVRAATAQRLRQESPXQ-RSETRTARPXR 323
A +GR ++ EGR R A A P + R E+R +R R
Sbjct: 353 APLRRGRRASERTTEGRPPRREAFAPAAAAVDPARARRESRASRRER 399
>UniRef50_Q115P0 Cluster: Chromosome segregation ATPase-like
protein; n=1; Trichodesmium erythraeum IMS101|Rep:
Chromosome segregation ATPase-like protein -
Trichodesmium erythraeum (strain IMS101)
Length = 1209
Score = 33.9 bits (74), Expect = 2.6
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 326 LEQSXQNIERTAEELRKAHPDVEKNATALR--EKLQAAVQNTVQEXHKLANXVXSNVXXT 499
LE+ +ER+ +L+K H +VEKN + L+ E+ + Q+ + E + + + +
Sbjct: 734 LEKIKLELERSGSDLQKTHQEVEKNQSQLKQAEEQKQQTQSKLTETEAILQAKEAELTES 793
Query: 500 NEKL 511
N +L
Sbjct: 794 NSEL 797
>UniRef50_A5HMP0 Cluster: Putative uncharacterized protein; n=1;
Lygus lineolaris|Rep: Putative uncharacterized protein -
Lygus lineolaris (Tarnished plant bug)
Length = 185
Score = 33.9 bits (74), Expect = 2.6
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 305 NGKAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXHK 463
N A AL+ ++ ++L+K +PD+ KNA L E ++ + QE K
Sbjct: 88 NPDASAALKNIKDKLKEAQDKLKKDNPDIAKNAEKLGESIKNTWDSITQEVEK 140
>UniRef50_Q15075 Cluster: Early endosome antigen 1; n=30;
Euteleostomi|Rep: Early endosome antigen 1 - Homo sapiens
(Human)
Length = 1411
Score = 33.9 bits (74), Expect = 2.6
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 299 DANGKAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXHKL 466
D K ++L+ S E+ ++ + A D+EK L+ +LQ ++NT++E +L
Sbjct: 860 DKLSKVSDSLKNSKSEFEKENQKGKAAILDLEKTCKELKHQLQVQMENTLKEQKEL 915
>UniRef50_A0Q371 Cluster: Methyl-accepting chemotaxis protein; n=1;
Clostridium novyi NT|Rep: Methyl-accepting chemotaxis
protein - Clostridium novyi (strain NT)
Length = 634
Score = 33.5 bits (73), Expect = 3.4
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +2
Query: 311 KAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXHKLANXVXSNV 490
K E ++ ++IE + E+L K + +N T + ++ V N V++ HKLA V
Sbjct: 295 KVIEKIKIVVESIEDSIEKLEKESEEGIRNVTEVEVAVEE-VANAVEDTHKLAYDSMEEV 353
Query: 491 XXTNEKLAPXIKA 529
EK IKA
Sbjct: 354 GYVKEKNELMIKA 366
>UniRef50_A7RV18 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 3224
Score = 33.5 bits (73), Expect = 3.4
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 6 ASPSALSLSTAHHGRQVRSSLRLHRSG-PRSDGATRRSRLLQGHRTPHQGVP*DFRTTV 179
A+ SA +S H ++VR L SG P+ D A RRS +LQ + D+R+T+
Sbjct: 1550 ANKSAFMVSATHWRQKVRDGDGLSVSGSPKEDSAMRRSSVLQSSTADIRSGDGDWRSTI 1608
>UniRef50_Q21004 Cluster: Putative uncharacterized protein amph-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein amph-1 - Caenorhabditis elegans
Length = 461
Score = 33.1 bits (72), Expect = 4.5
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 293 LGDANGKAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQ--NTVQEXHK 463
+G A E +Q N+ + ++ K H DV+ ++ALR L A Q +T+++ ++
Sbjct: 24 IGKAKATQDEVFDQHAANLNKQSKSCEKLHKDVKNYSSALRTLLSAEKQLRDTIRDAYE 82
>UniRef50_UPI000023D1F1 Cluster: hypothetical protein FG05573.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG05573.1 - Gibberella zeae PH-1
Length = 1064
Score = 32.7 bits (71), Expect = 6.0
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 73 CIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQ 177
C+ ++Q A+ + DAP F+++ T+ H+TL+ Q
Sbjct: 21 CVKISQLAIRQADAPASFRELSEQTRLLHETLDDQ 55
>UniRef50_Q3ERP6 Cluster: Phage-related protein; n=6; root|Rep:
Phage-related protein - Bacillus thuringiensis serovar
israelensis ATCC 35646
Length = 1341
Score = 32.7 bits (71), Expect = 6.0
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 299 DANGKAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXHKLAN 472
D E LEQ+ +NIE T EL K + + AT ++Q +Q + + N
Sbjct: 467 DVESVKKETLEQANKNIESTKAELNKKVQEAQNQATGQFNEVQEGLQGVSRTISNIEN 524
>UniRef50_Q4Q3I1 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 792
Score = 32.7 bits (71), Expect = 6.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 254 CSTDSEPSFQALLKSCASFDLVSELNCCSKVLWNSLVW 141
CS S P+ A + D+V+ L C LWN+L W
Sbjct: 698 CSQSSSPADMAEAATKRGLDVVAPLTHCDHHLWNNLAW 735
>UniRef50_Q4D9W4 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 1236
Score = 32.7 bits (71), Expect = 6.0
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2
Query: 275 RVSXAALGDANGKAXEALEQSXQNIERTAEELRKAHPDVEKNATALR 415
+V AL +++G++ E EQ + TAEELR+ + + TALR
Sbjct: 142 KVLENALVESSGESQETREQYRAYVATTAEELRQTRKSLRASETALR 188
>UniRef50_Q9Y8A0 Cluster: Differentiation-related protein Infp; n=1;
Uromyces appendiculatus|Rep: Differentiation-related
protein Infp - Uromyces appendiculatus (Rust fungus)
Length = 173
Score = 32.7 bits (71), Expect = 6.0
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 142 HTKEFHKTLEQQFNSLTK--SKDAQDFSKAWKDGSESVLQQLNAFAK 276
+T +F +TL Q + S S +QD+S W++ S Q +++F K
Sbjct: 60 YTSQFRQTLTQMYTSFHSIVSIGSQDYSAEWQNRFSSTFQSMSSFGK 106
>UniRef50_O34894 Cluster: Septation ring formation regulator ezrA;
n=3; Bacillus|Rep: Septation ring formation regulator
ezrA - Bacillus subtilis
Length = 562
Score = 32.7 bits (71), Expect = 6.0
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 299 DANGKAXEALEQSXQNIERTAEELRKAHPDVEKNATALR-EKLQA 430
DA A L + +IE+ EE++K H + +N ALR E+LQA
Sbjct: 371 DAEHVAYSLLVEEVASIEKQIEEVKKEHAEYRENLQALRKEELQA 415
>UniRef50_UPI0000E4830D Cluster: PREDICTED: similar to RNA-binding
protein, putative, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to RNA-binding
protein, putative, partial - Strongylocentrotus
purpuratus
Length = 106
Score = 32.3 bits (70), Expect = 7.9
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +2
Query: 326 LEQSXQNIERTAEELRKAHPDVE---KNATALREKLQAAVQNTVQEXHKLANXVXSNVXX 496
++++ +N++ T + +++ H +V+ KN + +Q T+QE HK N+
Sbjct: 13 VQETHKNVQETHKNVQETHKNVQETHKNLLGTHKSVQET-HTTIQETHKNVQETHKNIQE 71
Query: 497 TNEKL 511
T++ L
Sbjct: 72 THKNL 76
>UniRef50_Q8EMW1 Cluster: Methyl-accepting chemotaxis protein; n=1;
Oceanobacillus iheyensis|Rep: Methyl-accepting
chemotaxis protein - Oceanobacillus iheyensis
Length = 540
Score = 32.3 bits (70), Expect = 7.9
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +2
Query: 311 KAXEALEQSXQNIERTAEELR---KAHPDVEKNATALREKLQAAVQNTVQEXHKLANXVX 481
K +E S I++ + ++ K P VE+ TA+ E++ AAVQ LAN
Sbjct: 436 KVTSGVEVSYDAIDKFGQIMQTSIKIRPQVEE-VTAISEEMAAAVQQVTATAIDLANIAR 494
Query: 482 SNVXXTNEKLA 514
SN + E A
Sbjct: 495 SNAASSEEVAA 505
>UniRef50_Q15WP3 Cluster: Lipopolysaccharide biosynthesis; n=2;
Alteromonadales|Rep: Lipopolysaccharide biosynthesis -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 527
Score = 32.3 bits (70), Expect = 7.9
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +2
Query: 299 DANGKAXEALEQSXQNIERTAEELR----KAHPDVEKNATALREKLQAAVQNTVQEXHKL 466
D+N + QN+E +EL+ + HPDV + A +L E LQ + Q + E +
Sbjct: 257 DSNSSLSTRFDARIQNLEERLDELKLKYTELHPDVIE-ANSLLESLQTSRQEEIDEYLES 315
Query: 467 ANXVXSNVXXTN 502
AN S N
Sbjct: 316 ANAGESGGGSLN 327
>UniRef50_Q22RN9 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1965
Score = 32.3 bits (70), Expect = 7.9
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +2
Query: 299 DANGKAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXHKL 466
D+ + + L++ +N+E +E++ D+E+ ++L+ +N QE +KL
Sbjct: 521 DSKERENQLLQEDIKNLEEQNQEIQSKFKDIERKLNQQIKQLKDKAENQCQENYKL 576
>UniRef50_Q5JHN1 Cluster: DNA double-strand break repair rad50
ATPase; n=1; Thermococcus kodakarensis KOD1|Rep: DNA
double-strand break repair rad50 ATPase - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 883
Score = 32.3 bits (70), Expect = 7.9
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +2
Query: 326 LEQSXQNIERTAEELRKAHPDVEKNATALR--EKLQAAVQNTVQEXHKLANXVXSNV 490
LE+ + +E+TAEEL KA +++ LR E ++ +Q+ ++E K + V
Sbjct: 226 LEKELKELEKTAEELAKARVELKSEEGNLRELEAKKSGIQSMIRETEKRVEELKEKV 282
>UniRef50_O64299 Cluster: Exonuclease subunit 2; n=5; Viruses|Rep:
Exonuclease subunit 2 - Bacteriophage RB69
Length = 562
Score = 32.3 bits (70), Expect = 7.9
Identities = 15/50 (30%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Frame = +1
Query: 88 QGAMVRRDAPDFFKDIEHHTK----EFHKTLEQQFNSLTKSKDAQDFSKA 225
+GA++++ P F K I H+ K ++ +++++FN KS+ ++FS A
Sbjct: 419 KGAIIKKYVPLFNKQINHYLKIMEADYVFSIDEEFNESIKSRGREEFSYA 468
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 370,384,762
Number of Sequences: 1657284
Number of extensions: 5908919
Number of successful extensions: 28571
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28534
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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