Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_J13
(558 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein. 34 0.39
L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated prote... 34 0.39
U87315-2|AAB65500.2| 260|Homo sapiens syntaxin 1C protein. 31 2.7
U87315-1|AAK54507.2| 288|Homo sapiens syntaxin 1A protein. 31 2.7
L37792-1|AAA53519.1| 288|Homo sapiens syntaxin 1A protein. 31 2.7
D37932-1|BAA07151.1| 288|Homo sapiens HPC-1 protein. 31 2.7
CR457018-1|CAG33299.1| 288|Homo sapiens STX1A protein. 31 2.7
BC064644-1|AAH64644.1| 288|Homo sapiens syntaxin 1A (brain) pro... 31 2.7
BC003011-1|AAH03011.1| 251|Homo sapiens STX1A protein protein. 31 2.7
AF088488-1|AAC96124.1| 48|Homo sapiens T-cell receptor beta ch... 31 2.7
AC073846-3|AAS07470.1| 251|Homo sapiens unknown protein. 31 2.7
AC073846-2|AAS07469.1| 288|Homo sapiens unknown protein. 31 2.7
AB086954-1|BAC78519.1| 260|Homo sapiens syntaxin 1C protein. 31 2.7
BC130449-1|AAI30450.1| 1253|Homo sapiens PPP1R9A protein protein. 30 6.3
X66397-1|CAA47021.1| 2349|Homo sapiens Tpr protein. 29 8.4
U69668-1|AAB48030.1| 2363|Homo sapiens Tpr protein. 29 8.4
BC044830-1|AAH44830.1| 258|Homo sapiens chromosome 10 open read... 29 8.4
AL596220-1|CAI13119.1| 2363|Homo sapiens translocated promoter r... 29 8.4
AL133553-3|CAI17859.1| 2363|Homo sapiens translocated promoter r... 29 8.4
>X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.
Length = 1411
Score = 33.9 bits (74), Expect = 0.39
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 299 DANGKAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXHKL 466
D K ++L+ S E+ ++ + A D+EK L+ +LQ ++NT++E +L
Sbjct: 860 DKLSKVSDSLKNSKSEFEKENQKGKAAILDLEKTCKELKHQLQVQMENTLKEQKEL 915
>L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated protein
protein.
Length = 1410
Score = 33.9 bits (74), Expect = 0.39
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 299 DANGKAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXHKL 466
D K ++L+ S E+ ++ + A D+EK L+ +LQ ++NT++E +L
Sbjct: 860 DKLSKVSDSLKNSKSEFEKENQKGKAAILDLEKTCKELKHQLQVQMENTLKEQKEL 915
>U87315-2|AAB65500.2| 260|Homo sapiens syntaxin 1C protein.
Length = 260
Score = 31.1 bits (67), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 350 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 454
E+T EEL + D++K A +R KL++ Q+ QE
Sbjct: 69 EKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQE 103
>U87315-1|AAK54507.2| 288|Homo sapiens syntaxin 1A protein.
Length = 288
Score = 31.1 bits (67), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 350 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 454
E+T EEL + D++K A +R KL++ Q+ QE
Sbjct: 69 EKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQE 103
>L37792-1|AAA53519.1| 288|Homo sapiens syntaxin 1A protein.
Length = 288
Score = 31.1 bits (67), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 350 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 454
E+T EEL + D++K A +R KL++ Q+ QE
Sbjct: 69 EKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQE 103
>D37932-1|BAA07151.1| 288|Homo sapiens HPC-1 protein.
Length = 288
Score = 31.1 bits (67), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 350 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 454
E+T EEL + D++K A +R KL++ Q+ QE
Sbjct: 69 EKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQE 103
>CR457018-1|CAG33299.1| 288|Homo sapiens STX1A protein.
Length = 288
Score = 31.1 bits (67), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 350 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 454
E+T EEL + D++K A +R KL++ Q+ QE
Sbjct: 69 EKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQE 103
>BC064644-1|AAH64644.1| 288|Homo sapiens syntaxin 1A (brain)
protein.
Length = 288
Score = 31.1 bits (67), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 350 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 454
E+T EEL + D++K A +R KL++ Q+ QE
Sbjct: 69 EKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQE 103
>BC003011-1|AAH03011.1| 251|Homo sapiens STX1A protein protein.
Length = 251
Score = 31.1 bits (67), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 350 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 454
E+T EEL + D++K A +R KL++ Q+ QE
Sbjct: 69 EKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQE 103
>AF088488-1|AAC96124.1| 48|Homo sapiens T-cell receptor beta chain
protein.
Length = 48
Score = 31.1 bits (67), Expect = 2.7
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +3
Query: 27 LSTAHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP 158
L T HG R+S + H SG R GHR P + VP
Sbjct: 4 LRTGRHGTVSRASSQSHPSGQYLRAVLRAGHQAHGHRGPEKRVP 47
>AC073846-3|AAS07470.1| 251|Homo sapiens unknown protein.
Length = 251
Score = 31.1 bits (67), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 350 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 454
E+T EEL + D++K A +R KL++ Q+ QE
Sbjct: 69 EKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQE 103
>AC073846-2|AAS07469.1| 288|Homo sapiens unknown protein.
Length = 288
Score = 31.1 bits (67), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 350 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 454
E+T EEL + D++K A +R KL++ Q+ QE
Sbjct: 69 EKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQE 103
>AB086954-1|BAC78519.1| 260|Homo sapiens syntaxin 1C protein.
Length = 260
Score = 31.1 bits (67), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 350 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 454
E+T EEL + D++K A +R KL++ Q+ QE
Sbjct: 69 EKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQE 103
>BC130449-1|AAI30450.1| 1253|Homo sapiens PPP1R9A protein protein.
Length = 1253
Score = 29.9 bits (64), Expect = 6.3
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +2
Query: 281 SXAALGDANGKAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXH 460
S ALG + +++ + ++ + E+ RKA +EK LR K Q +Q ++
Sbjct: 1181 SDEALGMTASQDRAVVKKKLKEMKMSLEKARKAQEKMEKQREKLRRKEQEQMQRKSKKTE 1240
Query: 461 KLAN 472
K+ +
Sbjct: 1241 KMTS 1244
>X66397-1|CAA47021.1| 2349|Homo sapiens Tpr protein.
Length = 2349
Score = 29.5 bits (63), Expect = 8.4
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +2
Query: 326 LEQSXQNIERTAEEL----RKAHPDVEKNATALREKLQAAVQNTVQEXHKLANXVXSN 487
LE+ +E+ +EL R+A +E+ + L++ L ++VQN VQE + A+ SN
Sbjct: 1004 LEKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTL-SSVQNEVQEALQRASTALSN 1060
>U69668-1|AAB48030.1| 2363|Homo sapiens Tpr protein.
Length = 2363
Score = 29.5 bits (63), Expect = 8.4
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +2
Query: 326 LEQSXQNIERTAEEL----RKAHPDVEKNATALREKLQAAVQNTVQEXHKLANXVXSN 487
LE+ +E+ +EL R+A +E+ + L++ L ++VQN VQE + A+ SN
Sbjct: 1004 LEKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTL-SSVQNEVQEALQRASTALSN 1060
>BC044830-1|AAH44830.1| 258|Homo sapiens chromosome 10 open reading
frame 96 protein.
Length = 258
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +2
Query: 320 EALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXHKLANXV 478
E+L Q E AEE R+ +V T REK++ A + +E KL + V
Sbjct: 4 ESLFQHIIFTEHQAEESRRLMREVRSEITRCREKIKKATEELNEEKIKLESKV 56
>AL596220-1|CAI13119.1| 2363|Homo sapiens translocated promoter region
(to activated MET oncogene) protein.
Length = 2363
Score = 29.5 bits (63), Expect = 8.4
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +2
Query: 326 LEQSXQNIERTAEEL----RKAHPDVEKNATALREKLQAAVQNTVQEXHKLANXVXSN 487
LE+ +E+ +EL R+A +E+ + L++ L ++VQN VQE + A+ SN
Sbjct: 1004 LEKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTL-SSVQNEVQEALQRASTALSN 1060
>AL133553-3|CAI17859.1| 2363|Homo sapiens translocated promoter region
(to activated MET oncogene) protein.
Length = 2363
Score = 29.5 bits (63), Expect = 8.4
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +2
Query: 326 LEQSXQNIERTAEEL----RKAHPDVEKNATALREKLQAAVQNTVQEXHKLANXVXSN 487
LE+ +E+ +EL R+A +E+ + L++ L ++VQN VQE + A+ SN
Sbjct: 1004 LEKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTL-SSVQNEVQEALQRASTALSN 1060
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,801,289
Number of Sequences: 237096
Number of extensions: 907547
Number of successful extensions: 3909
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3909
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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