Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_J13
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 32 0.24
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 31 0.43
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 31 0.43
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 31 0.43
AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical ... 31 0.43
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 31 0.43
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 31 0.43
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr... 31 0.56
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 30 0.98
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 30 0.98
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 30 0.98
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 30 0.98
Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical pr... 30 1.3
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 30 1.3
AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein. 30 1.3
AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory car... 28 5.2
AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical... 28 5.2
AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synapt... 28 5.2
Z46828-2|CAA86857.1| 434|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 32.3 bits (70), Expect = 0.24
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 293 LGDANGKAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQ--NTVQEXHK 463
+G A E +Q N+ + ++ K H DV+ ++ALR L A Q +T+++ ++
Sbjct: 24 IGKAKATQDEVFDQHAANLNKQSKSCEKLHKDVKNYSSALRTLLSAEKQLRDTIRDAYE 82
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 31.5 bits (68), Expect = 0.43
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +2
Query: 311 KAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXHKLANXVXSNV 490
K E L++ + + +E+LRK V+ + ++ VQE KL + +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 491 XXTNEKLA 514
T K++
Sbjct: 2604 EETRAKIS 2611
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 31.5 bits (68), Expect = 0.43
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +2
Query: 311 KAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXHKLANXVXSNV 490
K E L++ + + +E+LRK V+ + ++ VQE KL + +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 491 XXTNEKLA 514
T K++
Sbjct: 2604 EETRAKIS 2611
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 31.5 bits (68), Expect = 0.43
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +2
Query: 311 KAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXHKLANXVXSNV 490
K E L++ + + +E+LRK V+ + ++ VQE KL + +N+
Sbjct: 358 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 417
Query: 491 XXTNEKLA 514
T K++
Sbjct: 418 EETRAKIS 425
>AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical
protein ZK973.11 protein.
Length = 447
Score = 31.5 bits (68), Expect = 0.43
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 148 KEFHKTLEQQFNSLTKSKDAQD-FSKAWKDGSESVLQ 255
+EFHKT E+ L K D + F AW DGS+ Q
Sbjct: 266 REFHKTAEEASKELRKHPDLWNRFQFAWLDGSDLASQ 302
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 31.5 bits (68), Expect = 0.43
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +2
Query: 311 KAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXHKLANXVXSNV 490
K E L++ + + +E+LRK V+ + ++ VQE KL + +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 491 XXTNEKLA 514
T K++
Sbjct: 2604 EETRAKIS 2611
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 31.5 bits (68), Expect = 0.43
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +2
Query: 311 KAXEALEQSXQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQEXHKLANXVXSNV 490
K E L++ + + +E+LRK V+ + ++ VQE KL + +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 491 XXTNEKLA 514
T K++
Sbjct: 2604 EETRAKIS 2611
>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
protein C18H2.1 protein.
Length = 1770
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 61 VLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQ 210
V C++ + + D +F KDI+ K+ HKTLE + + K +D Q
Sbjct: 580 VFLECVSRLRKTAI--DGENFVKDIQKTYKKSHKTLESDSSPVLKLEDPQ 627
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 30.3 bits (65), Expect = 0.98
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 299 DANGKAXEALEQSXQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQEXHK 463
+A K Q ++++ +ELRKA + + +EKL +VQN++ E H+
Sbjct: 387 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHR 443
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 30.3 bits (65), Expect = 0.98
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 299 DANGKAXEALEQSXQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQEXHK 463
+A K Q ++++ +ELRKA + + +EKL +VQN++ E H+
Sbjct: 387 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHR 443
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 30.3 bits (65), Expect = 0.98
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 299 DANGKAXEALEQSXQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQEXHK 463
+A K Q ++++ +ELRKA + + +EKL +VQN++ E H+
Sbjct: 147 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHR 203
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 30.3 bits (65), Expect = 0.98
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 299 DANGKAXEALEQSXQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQEXHK 463
+A K Q ++++ +ELRKA + + +EKL +VQN++ E H+
Sbjct: 387 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHR 443
>Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical
protein K08H10.1 protein.
Length = 733
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +2
Query: 281 SXAALGDANGKAXEALEQSX--QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 454
S + G+ A +L+ S N +T E L + V+++A+ ++L+ QNT
Sbjct: 90 SASNAGNKISNAFTSLKDSITGDNAHKTGEALNDNYESVKESASEAADRLKEPAQNTADN 149
Query: 455 XHKLANXVXSNVXXTNEKLAPXIKAAYDDFAKN 553
LAN + E +K D A+N
Sbjct: 150 AKDLANQTGEEMSDAFES----VKQLTSDTAEN 178
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 91 GAMVRRDAPDFFKDIEHHTKEFH--KTLEQQFNSLTKSKDAQDFSKAWKDGSES 246
G +A ++F D++HHT F T + + +D D K W SE+
Sbjct: 519 GTSTSNEAREYFSDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDERKEWIRRSEN 572
>AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein.
Length = 733
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +2
Query: 281 SXAALGDANGKAXEALEQSX--QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 454
S + G+ A +L+ S N +T E L + V+++A+ ++L+ QNT
Sbjct: 90 SASNAGNKISNAFTSLKDSITGDNAHKTGEALNDNYESVKESASEAADRLKEPAQNTADN 149
Query: 455 XHKLANXVXSNVXXTNEKLAPXIKAAYDDFAKN 553
LAN + E +K D A+N
Sbjct: 150 AKDLANQTGEEMSDAFES----VKQLTSDTAEN 178
>AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory
carrier membrane protein protein.
Length = 335
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 281 SXAALGDANGKAXEALEQSXQNIERTAEELRKAHPDVEK--NATALREKLQAAVQNTVQE 454
S +LG+ + + L + Q++ER A+ELR ++++ + A L QN
Sbjct: 56 STGSLGNKSAGMDDELFRKQQDLERRAQELRMREEELDRRQRSAAGGNNLNTNAQNNAPR 115
Query: 455 XH 460
H
Sbjct: 116 PH 117
>AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical
protein F57B10.4 protein.
Length = 691
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +1
Query: 127 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQXSA 294
KD+++H K+ H L Q + + + D DF G+ S+ +++ + +L A
Sbjct: 67 KDVKNHQKKLHSFLAQSTDQVNSTIDKMDF--FCSKGNHSLPMEMSVLSITLPYEA 120
>AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synaptic
vesicle protein)homolog protein 1 protein.
Length = 335
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 281 SXAALGDANGKAXEALEQSXQNIERTAEELRKAHPDVEK--NATALREKLQAAVQNTVQE 454
S +LG+ + + L + Q++ER A+ELR ++++ + A L QN
Sbjct: 56 STGSLGNKSAGMDDELFRKQQDLERRAQELRMREEELDRRQRSAAGGNNLNTNAQNNAPR 115
Query: 455 XH 460
H
Sbjct: 116 PH 117
>Z46828-2|CAA86857.1| 434|Caenorhabditis elegans Hypothetical
protein R03D7.4 protein.
Length = 434
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 6 ASPSALSLSTAHHGRQVRSSLRLHRSGPRSDGATRRSR 119
A+PSAL LS A ++ +L PR G SR
Sbjct: 366 ATPSALQLSQARKNVKIEGKAQLRTITPRGGGVPSTSR 403
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 75 HRSGPRSDGATRRSRLLQGHRTPHQ 149
HR GP GAT R+L+ R P++
Sbjct: 92 HRRGPADQGATYDERILEIRRDPNR 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,180,556
Number of Sequences: 27780
Number of extensions: 134602
Number of successful extensions: 649
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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