Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J11
         (651 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8SYQ4 Cluster: RE42475p; n=9; Endopterygota|Rep: RE424...   114   1e-24
UniRef50_A5NR62 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  
UniRef50_Q75GM8 Cluster: Putative uncharacterized protein OSJNBa...    33   7.8  

>UniRef50_Q8SYQ4 Cluster: RE42475p; n=9; Endopterygota|Rep: RE42475p
           - Drosophila melanogaster (Fruit fly)
          Length = 148

 Score =  114 bits (275), Expect = 1e-24
 Identities = 48/64 (75%), Positives = 53/64 (82%)
 Frame = +1

Query: 292 FCGRSTCVVSEDQPPRLLELVEDCGPLPLTNPKCQLDTEKTNKTAPFPGCCPIFTCEEGA 471
           FCGRSTCV +E+   +L ELVEDCGPLPL N KC+LDTEKTNKTA FP CCPIFTC+ G 
Sbjct: 72  FCGRSTCVQNEENDAKLFELVEDCGPLPLANDKCKLDTEKTNKTASFPYCCPIFTCDPGV 131

Query: 472 KLEY 483
           KLEY
Sbjct: 132 KLEY 135



 Score = 77.4 bits (182), Expect = 3e-13
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = +3

Query: 177 KTFRRLIPADVLRDFPGMCFASTRCITVEPGNTWELSPF 293
           + F+RLIPADVLRDFPGMCFASTRC TVEPG +W+L+PF
Sbjct: 34  RIFKRLIPADVLRDFPGMCFASTRCATVEPGKSWDLTPF 72


>UniRef50_A5NR62 Cluster: Putative uncharacterized protein; n=1;
            Methylobacterium sp. 4-46|Rep: Putative uncharacterized
            protein - Methylobacterium sp. 4-46
          Length = 1171

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 264  PGNTWELSPFLRPQHLRRQRGPAPQAAGACRRLRTSA 374
            PG +   +P  RP+H R Q  PA +  G  RRLR +A
Sbjct: 989  PGRSDRGAPGRRPRHRRLQDRPAAERQGGLRRLRAAA 1025


>UniRef50_Q75GM8 Cluster: Putative uncharacterized protein
           OSJNBa0018K15.11; n=3; Oryza sativa|Rep: Putative
           uncharacterized protein OSJNBa0018K15.11 - Oryza sativa
           subsp. japonica (Rice)
          Length = 613

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +3

Query: 264 PGNTWELSPFLRPQHLRRQRGPAPQAAGACRRLRTSATHQP 386
           PG  W+     R +HLRR   PA  AAG     RT+    P
Sbjct: 423 PGIDWKQPSLRREEHLRRMERPAKAAAGLLPPARTTRQSAP 463


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,783,896
Number of Sequences: 1657284
Number of extensions: 8216100
Number of successful extensions: 21050
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21043
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)