Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J11
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase pro...    29   2.9  
AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase pro...    29   2.9  
U23172-18|ABC48253.1|  915|Caenorhabditis elegans Hypothetical p...    28   5.0  
U23172-17|ABC48254.1|  923|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z68227-18|CAA92521.1|  869|Caenorhabditis elegans Hypothetical p...    27   8.7  
Z68220-11|CAA92493.1|  869|Caenorhabditis elegans Hypothetical p...    27   8.7  

>AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase
           protein.
          Length = 567

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 218 FPRNVLRVHPLHHRRARQHL 277
           FP N L +H  HHRR   HL
Sbjct: 89  FPSNFLNIHDYHHRRWALHL 108


>AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase
           protein 1 protein.
          Length = 567

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 218 FPRNVLRVHPLHHRRARQHL 277
           FP N L +H  HHRR   HL
Sbjct: 89  FPSNFLNIHDYHHRRWALHL 108


>U23172-18|ABC48253.1|  915|Caenorhabditis elegans Hypothetical
           protein F25B5.1a protein.
          Length = 915

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -2

Query: 458 QVKIGQQPGKGAVLLVFSVSNWHLGL 381
           ++ I ++ G GAV LV +V +WH GL
Sbjct: 789 RLSIYEEKGNGAVDLVGTVDDWHKGL 814


>U23172-17|ABC48254.1|  923|Caenorhabditis elegans Hypothetical
           protein F25B5.1b protein.
          Length = 923

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -2

Query: 458 QVKIGQQPGKGAVLLVFSVSNWHLGL 381
           ++ I ++ G GAV LV +V +WH GL
Sbjct: 797 RLSIYEEKGNGAVDLVGTVDDWHKGL 822


>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical
           protein M142.6 protein.
          Length = 1014

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = +3

Query: 285 SPFLRPQHLRRQRGPAPQAAGACRRLRTSA-THQPQVPIRYRKDQ*DRSLPWLLPDLYLR 461
           +P  +P+  R Q G  P   G          +HQ Q P ++   Q        LP  + R
Sbjct: 462 TPPKQPRQKRYQMGIPPNRMGYSSDAPPFIPSHQQQPPPQFFNSQ-------HLPQRF-R 513

Query: 462 GGRQAGVP*APHPSP 506
           GGRQ G P  P P P
Sbjct: 514 GGRQRGAPPPPPPQP 528


>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical
           protein M142.6 protein.
          Length = 1014

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = +3

Query: 285 SPFLRPQHLRRQRGPAPQAAGACRRLRTSA-THQPQVPIRYRKDQ*DRSLPWLLPDLYLR 461
           +P  +P+  R Q G  P   G          +HQ Q P ++   Q        LP  + R
Sbjct: 462 TPPKQPRQKRYQMGIPPNRMGYSSDAPPFIPSHQQQPPPQFFNSQ-------HLPQRF-R 513

Query: 462 GGRQAGVP*APHPSP 506
           GGRQ G P  P P P
Sbjct: 514 GGRQRGAPPPPPPQP 528


>Z68227-18|CAA92521.1|  869|Caenorhabditis elegans Hypothetical
           protein F49C12.15 protein.
          Length = 869

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 294 LRPQHLRRQRGPAPQAAGACRRLRTSATHQPQVPIRYR 407
           LR     R+R P+  A+ + R   TS T    +PIRYR
Sbjct: 117 LRRSRSARRRSPSSSASRS-RSRSTSRTRAQSIPIRYR 153


>Z68220-11|CAA92493.1|  869|Caenorhabditis elegans Hypothetical
           protein F49C12.15 protein.
          Length = 869

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 294 LRPQHLRRQRGPAPQAAGACRRLRTSATHQPQVPIRYR 407
           LR     R+R P+  A+ + R   TS T    +PIRYR
Sbjct: 117 LRRSRSARRRSPSSSASRS-RSRSTSRTRAQSIPIRYR 153


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,282,993
Number of Sequences: 27780
Number of extensions: 189043
Number of successful extensions: 413
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)