BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P04_F_J07 (651 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888 31 0.80 12_02_0387 + 18453328-18453456,18453699-18453836,18454085-184541... 28 7.4 01_01_1069 - 8420454-8420670,8421272-8421447,8421556-8421738,842... 28 7.4 02_01_0583 + 4320543-4321613,4321725-4321967,4323506-4323883 27 9.8 >04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888 Length = 748 Score = 31.1 bits (67), Expect = 0.80 Identities = 20/49 (40%), Positives = 25/49 (51%) Frame = +1 Query: 244 MNTKSTDKTAITLKLSFTSNDNASLVYDVLNVDXELKGSGVHREFQLKS 390 +N K D TA +L FT SL Y+V + EL+ REF LKS Sbjct: 82 LNQKLIDATA---RLEFTHKQCGSLQYEVRILQKELEIRNKEREFDLKS 127 >12_02_0387 + 18453328-18453456,18453699-18453836,18454085-18454144, 18461532-18462591,18463022-18463521 Length = 628 Score = 27.9 bits (59), Expect = 7.4 Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 12/101 (11%) Frame = +1 Query: 280 LKLSFTSNDNA---SLVYDVLNVDXELK---GSGVHREFQLKSNVLYIEFKS------LX 423 L ++F S +N +++DV+++ G +F+ S+ Y++ K + Sbjct: 507 LLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKFEAISHHNYLKLKMPGPTGVIV 566 Query: 424 LKRLRVAVNAILKNILLITKTVENFATK*PAMPEHTPAPTP 546 +K L+ + A ++ +I + V + T+ P+HTP PTP Sbjct: 567 VKGLQ-PLAASKGDLAMINRAVHSVETRPYERPKHTPKPTP 606 >01_01_1069 - 8420454-8420670,8421272-8421447,8421556-8421738, 8421885-8421980,8422064-8422192,8422266-8422445, 8422524-8422634,8422714-8422869,8422983-8423078, 8423160-8423327,8423402-8423642,8423724-8423851, 8424042-8424134,8424214-8424309,8424431-8424523, 8424741-8424850,8424999-8425134,8425215-8425315, 8426029-8426152,8426237-8426411,8426523-8426681, 8427423-8427536,8427669-8427848,8428926-8429005 Length = 1113 Score = 27.9 bits (59), Expect = 7.4 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +1 Query: 16 KTLCIDNTLNREKLYFPTAVKSRVKTI 96 K L N L REKL FPT SR++T+ Sbjct: 148 KKLIEANPLFREKLVFPTLKASRLRTL 174 >02_01_0583 + 4320543-4321613,4321725-4321967,4323506-4323883 Length = 563 Score = 27.5 bits (58), Expect = 9.8 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Frame = +2 Query: 77 RVG*KPSNRNNYYLQK*VHNLKLYTNIIKRKTYY---VSVKSVNITYKH 214 ++G P R YLQ VH L++ IIK +T +V SVN+ H Sbjct: 329 KIGHAPQLRMLGYLQPGVHQLEIGNTIIKARTIVRPGTTVPSVNMLALH 377 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,022,433 Number of Sequences: 37544 Number of extensions: 246821 Number of successful extensions: 557 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 543 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 557 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1620349964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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