Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J07
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118873-1|AAM50733.1|  158|Drosophila melanogaster GM30016p pro...    50   2e-06
AE014297-3915|AAF56563.2|  158|Drosophila melanogaster CG14550-P...    50   2e-06
AY113555-1|AAM29560.1|  127|Drosophila melanogaster RH02374p pro...    29   7.2  
AL009147-5|CAA15630.1|  136|Drosophila melanogaster EG:171D11.5 ...    29   7.2  
AE014298-44|AAF45512.2|  127|Drosophila melanogaster CG17778-PA ...    29   7.2  

>AY118873-1|AAM50733.1|  158|Drosophila melanogaster GM30016p
           protein.
          Length = 158

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +1

Query: 517 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWAFTPDSF-LHYF 648
           MPEHTPAPTP R++YGF  Y+       ++  WA  P  F LH +
Sbjct: 1   MPEHTPAPTPHRAVYGFAFYMLFTVLFLVYVTWALLPVEFGLHSY 45


>AE014297-3915|AAF56563.2|  158|Drosophila melanogaster CG14550-PA
           protein.
          Length = 158

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +1

Query: 517 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWAFTPDSF-LHYF 648
           MPEHTPAPTP R++YGF  Y+       ++  WA  P  F LH +
Sbjct: 1   MPEHTPAPTPHRAVYGFAFYMLFTVLFLVYVTWALLPVEFGLHSY 45


>AY113555-1|AAM29560.1|  127|Drosophila melanogaster RH02374p
           protein.
          Length = 127

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 596 RVVLLNKYRKKPYKDLDGVGAGV 528
           R+    K RKKP K LDG G G+
Sbjct: 103 RIASSQKGRKKPEKGLDGAGVGI 125


>AL009147-5|CAA15630.1|  136|Drosophila melanogaster EG:171D11.5
           protein.
          Length = 136

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 596 RVVLLNKYRKKPYKDLDGVGAGV 528
           R+    K RKKP K LDG G G+
Sbjct: 112 RIASSQKGRKKPEKGLDGAGVGI 134


>AE014298-44|AAF45512.2|  127|Drosophila melanogaster CG17778-PA
           protein.
          Length = 127

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 596 RVVLLNKYRKKPYKDLDGVGAGV 528
           R+    K RKKP K LDG G G+
Sbjct: 103 RIASSQKGRKKPEKGLDGAGVGI 125


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,834,835
Number of Sequences: 53049
Number of extensions: 462125
Number of successful extensions: 1108
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)