Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J07
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93393-2|CAB07689.2|  890|Caenorhabditis elegans Hypothetical pr...    47   1e-05
Z82076-1|CAB04934.1|  363|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AL031632-1|CAA21004.1|  248|Caenorhabditis elegans Hypothetical ...    28   5.0  

>Z93393-2|CAB07689.2|  890|Caenorhabditis elegans Hypothetical
           protein Y48E1B.2a protein.
          Length = 890

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +1

Query: 511 PAMPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWAFTPDSFLH 642
           P+   H P P P+R +YGF LY+ S T   ++ IWA TP   L+
Sbjct: 19  PSEEIHLPGPHPARGIYGFALYIVSWTLFVIYLIWAITPVPILY 62


>Z82076-1|CAB04934.1|  363|Caenorhabditis elegans Hypothetical
           protein W07G1.2 protein.
          Length = 363

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +1

Query: 358 SGVHREFQLKSNVLYIEFKSLXLKRLRVAVNAILKNI-LLITKTVENFA 501
           S +   FQ+  N++YI   +L    +   + A+ +N    +TKT+ENFA
Sbjct: 182 SAILHFFQILQNLVYIVLIALIPNVVSSVIFAVTENYNQKVTKTIENFA 230


>AL031632-1|CAA21004.1|  248|Caenorhabditis elegans Hypothetical
           protein Y32B12B.1 protein.
          Length = 248

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 546 WCRCWCVFRHCWLF 505
           +CRC CV+R  WLF
Sbjct: 14  FCRCLCVYRCLWLF 27


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,444,599
Number of Sequences: 27780
Number of extensions: 262835
Number of successful extensions: 627
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)