Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J07
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    25   0.63 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    25   0.84 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.9  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   5.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   5.9  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   7.8  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   7.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.8  

>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 423 FKTPKSSCECDPKKYTSYHKNCGKLCNK 506
           F TP  S +C+ K++      C K+C K
Sbjct: 21  FVTPTMSIKCNCKRHVIKPHICRKICGK 48


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 93  GFYPTLDCRRKIKFFSVKCVIYAKC 19
           G  P +      K + +KC IYAKC
Sbjct: 44  GQTPLIKLNNIPKSYGIKCEIYAKC 68


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +2

Query: 152 NIIKRKTYYVSVKSVNITYKH 214
           +I+  K YY+S   +++ + H
Sbjct: 180 SILAIKVYYISCPEISVNFAH 200


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = +2

Query: 140 KLYTNIIKRKTYYVSVKSVNITYKHTILK 226
           K +   +    + ++  +  +TYKHTI++
Sbjct: 47  KYFEQTLNELNFNLNYVNKGVTYKHTIIE 75


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 507 FCCKVFHSFCDKKYIF 460
           F  K+F +F D+KY++
Sbjct: 427 FVVKLFKTFKDRKYLY 442


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 95  SNRNNYYLQK*VHNLKLYTNI 157
           SN NNY      +N KLY NI
Sbjct: 92  SNYNNYNNNYNNYNKKLYYNI 112


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 539 RHHQDLYMASF 571
           RHH DLY  S+
Sbjct: 774 RHHDDLYSQSY 784


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +1

Query: 196 KHNL*TYYIKIISLIEMNTKSTDKTAITLKLSFTSNDNASLVYDV 330
           K N+  +Y+    L  ++  S DK+     +S    DN  +  DV
Sbjct: 290 KLNVNEFYMAFSKLYSVSVVSLDKSLEVNHISARVGDNVEIKCDV 334


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,735
Number of Sequences: 438
Number of extensions: 3287
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)