Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J06
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           25   2.7  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    24   3.6  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   6.3  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    23   8.4  

>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 410 GDPTKSPSCELGGPGSLKSERLSSD 484
           G     P  ++GGPG+++S+ L  D
Sbjct: 134 GTQMGGPGTQMGGPGTVESQDLFGD 158


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +2

Query: 458 LKSERL--SSDSNDILDPQTGLRSSTNNLQDGNPN 556
           L+SER+  S D  D L   +   S+ NN   GN N
Sbjct: 177 LRSERIRDSRDERDSLPNASSNNSNNNNNSSGNNN 211


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 453 PGPPSSQEGDFVGSPSLSMRPS 388
           P PP   +G   G P   MRP+
Sbjct: 298 PRPPMPMQGGAPGGPPQGMRPN 319


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -3

Query: 421 CWVTVAVHEAVDLCFNAVNSKV*RRIFARGLTMG 320
           CWV+ ++     L  +A  + + R I+A+G  +G
Sbjct: 389 CWVSGSLFVVPALIISACYAVIVRTIWAKGTILG 422


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,892
Number of Sequences: 2352
Number of extensions: 13274
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)