Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J06
         (651 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC028290-1|AAH28290.1|  767|Homo sapiens TBC1 domain family, mem...    34   0.51 
BC101486-1|AAI01487.1| 1031|Homo sapiens zinc finger protein 445...    33   0.67 
AY295873-1|AAP50258.1| 1031|Homo sapiens zinc finger protein pro...    33   0.67 
AY262260-1|AAP36990.1| 1031|Homo sapiens zinc finger protein pro...    33   0.67 
AY884293-1|AAX84184.1| 1117|Homo sapiens cytospin A protein.           31   2.7  
AB209022-1|BAD92259.1|  939|Homo sapiens KIAA0376 protein varian...    31   2.7  
AB002374-1|BAA21574.1|  885|Homo sapiens KIAA0376 protein.             31   2.7  

>BC028290-1|AAH28290.1|  767|Homo sapiens TBC1 domain family, member
           16 protein.
          Length = 767

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
 Frame = +2

Query: 317 EPHSQPSGEDSASDLGVDGIKTEIDGLMDSDGDPTKSPSCELGGPGSLKSER----LSSD 484
           EP  +   ED + +L  +G+    D   DSD D   SP C      +L   R    L SD
Sbjct: 201 EPRPEAGEEDGSLELSAEGVSR--DSSFDSDSDTFSSPFCLSPISAALAESRGSVFLESD 258

Query: 485 SNDILDPQTGLRSSTNN 535
           S+       GLR   +N
Sbjct: 259 SSPPSSSDAGLRFPDSN 275


>BC101486-1|AAI01487.1| 1031|Homo sapiens zinc finger protein 445
           protein.
          Length = 1031

 Score = 33.5 bits (73), Expect = 0.67
 Identities = 18/59 (30%), Positives = 34/59 (57%)
 Frame = +2

Query: 305 RVKIEPHSQPSGEDSASDLGVDGIKTEIDGLMDSDGDPTKSPSCELGGPGSLKSERLSS 481
           RV ++ H+  SGE++ + L  + ++ ++DG    D  P +SP     G G+L+S ++ S
Sbjct: 112 RVWVQLHNPESGEEAVALL--EELQRDLDGTSWRDPGPAQSPDVHWMGTGALRSAQIWS 168


>AY295873-1|AAP50258.1| 1031|Homo sapiens zinc finger protein
           protein.
          Length = 1031

 Score = 33.5 bits (73), Expect = 0.67
 Identities = 18/59 (30%), Positives = 34/59 (57%)
 Frame = +2

Query: 305 RVKIEPHSQPSGEDSASDLGVDGIKTEIDGLMDSDGDPTKSPSCELGGPGSLKSERLSS 481
           RV ++ H+  SGE++ + L  + ++ ++DG    D  P +SP     G G+L+S ++ S
Sbjct: 112 RVWVQLHNPESGEEAVALL--EELQRDLDGTSWRDPGPAQSPDVHWMGTGALRSAQIWS 168


>AY262260-1|AAP36990.1| 1031|Homo sapiens zinc finger protein
           protein.
          Length = 1031

 Score = 33.5 bits (73), Expect = 0.67
 Identities = 18/59 (30%), Positives = 34/59 (57%)
 Frame = +2

Query: 305 RVKIEPHSQPSGEDSASDLGVDGIKTEIDGLMDSDGDPTKSPSCELGGPGSLKSERLSS 481
           RV ++ H+  SGE++ + L  + ++ ++DG    D  P +SP     G G+L+S ++ S
Sbjct: 112 RVWVQLHNPESGEEAVALL--EELQRDLDGTSWRDPGPAQSPDVHWMGTGALRSAQIWS 168


>AY884293-1|AAX84184.1| 1117|Homo sapiens cytospin A protein.
          Length = 1117

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 341 EDSASDLGVDGIKTEIDGLMDSDGDPTKSPSCELGGPGSLKSERLSSDSNDILDPQ 508
           ++S    G   +  EI     SDG  T + S E   PGS++ + LS D N ++D Q
Sbjct: 283 DNSEKLFGYQSLSPEITPGNQSDGGGTLTSSVEGSAPGSVE-DLLSQDENTLMDHQ 337


>AB209022-1|BAD92259.1|  939|Homo sapiens KIAA0376 protein variant
           protein.
          Length = 939

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 341 EDSASDLGVDGIKTEIDGLMDSDGDPTKSPSCELGGPGSLKSERLSSDSNDILDPQ 508
           ++S    G   +  EI     SDG  T + S E   PGS++ + LS D N ++D Q
Sbjct: 311 DNSEKLFGYQSLSPEITPGNQSDGGGTLTSSVEGSAPGSVE-DLLSQDENTLMDHQ 365


>AB002374-1|BAA21574.1|  885|Homo sapiens KIAA0376 protein.
          Length = 885

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 341 EDSASDLGVDGIKTEIDGLMDSDGDPTKSPSCELGGPGSLKSERLSSDSNDILDPQ 508
           ++S    G   +  EI     SDG  T + S E   PGS++ + LS D N ++D Q
Sbjct: 127 DNSEKLFGYQSLSPEITPGNQSDGGGTLTSSVEGSAPGSVE-DLLSQDENTLMDHQ 181


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,777,780
Number of Sequences: 237096
Number of extensions: 2038694
Number of successful extensions: 9506
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9503
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)