Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J04
         (649 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0703 - 19614057-19614264,19615305-19615407,19615880-196159...    29   3.2  
05_04_0443 - 21283680-21283940,21284044-21284118,21284620-212846...    28   7.4  
01_06_1467 + 37570289-37570771,37571818-37571892,37572006-37572266     28   7.4  

>09_04_0703 -
           19614057-19614264,19615305-19615407,19615880-19615973,
           19616216-19616229,19616384-19616595,19617653-19617940,
           19618275-19618362,19618444-19618515,19618597-19618672,
           19618755-19618813,19618953-19619016,19619253-19619402
          Length = 475

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +1

Query: 289 STNQF*IKHNLFYLHHTILIVFRDKWQATSAHSY 390
           ST  + + H+L   H + + ++R K+Q T  +SY
Sbjct: 229 STEPYIVAHHLLLAHASAVSIYRQKYQVTILNSY 262


>05_04_0443 -
           21283680-21283940,21284044-21284118,21284620-21284649,
           21286744-21287247
          Length = 289

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -2

Query: 285 FYFXVFLGLIGGWSSSVEQ 229
           F+F VFLGL   WS+SV++
Sbjct: 150 FFFIVFLGLTLSWSASVKK 168


>01_06_1467 + 37570289-37570771,37571818-37571892,37572006-37572266
          Length = 272

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -2

Query: 285 FYFXVFLGLIGGWSSSVEQ 229
           F+F VFLGL   WS+SV++
Sbjct: 143 FFFIVFLGLTLSWSASVKK 161


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,681,771
Number of Sequences: 37544
Number of extensions: 172664
Number of successful extensions: 332
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)