Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J03
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.1  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.8  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   3.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   3.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.6  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +3

Query: 309 TNYPEEPVRVGEIVV 353
           T YP++P+R G+I++
Sbjct: 346 TTYPKQPLRFGKILL 360


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/17 (41%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = -2

Query: 465 HQRY-YCHLWLRTLLCH 418
           H+ Y +C+LW+  L+C+
Sbjct: 170 HEFYGFCYLWVLILICN 186


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 141 NKRQFMYQVLSFGMIVSSALMIWKGLMVVTGSE 239
           N R + YQVL FG + ++     + + VV G+E
Sbjct: 418 NGRSYTYQVLPFG-LKTAVGSFSRAMDVVLGTE 449


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 172 LNTWYMNCRLFIRRTSSN 119
           +NT+Y N  +F+R   SN
Sbjct: 27  INTFYSNKEIFLRELISN 44


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 116 TFQQLLI*SVIFKGNNAVQCLVS*SF 39
           TF +LLI  V   GN+AV  ++  SF
Sbjct: 77  TFAKLLIFVVSLSGNSAVFIMLIISF 102


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 358  LKTTISPTRTGSSG*LVKNSKSP 290
            LK T  P  +GSSG     SKSP
Sbjct: 1106 LKGTAVPPPSGSSGPGSTGSKSP 1128


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 131 AANEQAAVHVPSVKLWYD 184
           A+N  A +H+P+ +  YD
Sbjct: 48  ASNASAPLHIPAKRAAYD 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,589
Number of Sequences: 336
Number of extensions: 3330
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)