Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J03
         (643 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione S-tran...    27   0.67 
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    26   1.2  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    26   1.2  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    24   3.6  
AY146727-1|AAO12087.1|  139|Anopheles gambiae odorant-binding pr...    23   8.2  

>AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione
           S-transferase u2 protein.
          Length = 222

 Score = 26.6 bits (56), Expect = 0.67
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 262 DSTTTIGLSLPVTTIKPFHIIKAEDTIIPKLNTWYMNCRL 143
           ++ T   LSL  T     H    + T  P+LN WY +CR+
Sbjct: 154 ENLTIADLSLVPTIASAVHC-GLDLTNYPRLNAWYESCRV 192


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -1

Query: 406 CSFNTL*TIGISRPXTLKTTISPTRTGSS 320
           C+FNTL T+ + R  T   +I PT  GSS
Sbjct: 211 CTFNTLDTVYMFRNAT-APSIFPTEVGSS 238


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -1

Query: 406 CSFNTL*TIGISRPXTLKTTISPTRTGSS 320
           C+FNTL T+ + R  T   +I PT  GSS
Sbjct: 211 CTFNTLDTVYMFRNAT-APSIFPTEVGSS 238


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -2

Query: 474 SLCHQRYYCH--LWLRTLLCHCSFHVVSILCEQS 379
           SL   R +C   +WLR+  CH S   VS + + S
Sbjct: 5   SLLLFRQFCRDIVWLRSCSCHSSVCAVSFVMQCS 38


>AY146727-1|AAO12087.1|  139|Anopheles gambiae odorant-binding
           protein AgamOBP20 protein.
          Length = 139

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 202 IKAEDTIIPKLNTWYMNCRLFIRRTSSNRLSNSC 101
           +K  DTI+P      M   L I RT ++ + N+C
Sbjct: 86  VKQIDTIMPDELAGPMRAALDICRTVADGIKNNC 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,925
Number of Sequences: 2352
Number of extensions: 13830
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)