BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P04_F_I23 (506 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20 pro... 185 9e-47 BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20 p... 185 9e-47 BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20 p... 185 9e-47 AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20 p... 185 9e-47 AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20 p... 113 3e-25 AK128833-1|BAC87633.1| 286|Homo sapiens protein ( Homo sapiens ... 29 7.1 >L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20 protein. Length = 119 Score = 185 bits (450), Expect = 9e-47 Identities = 93/116 (80%), Positives = 99/116 (85%), Gaps = 1/116 (0%) Frame = +2 Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304 KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63 Query: 305 TTRKTPCGEGSKTXDRFQMXIHXXVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 472 TTRKTPCGEGSKT DRFQM IH +IDLHSPSEIVKQITSI+IEPGV VEVTIADA Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119 >BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20 protein. Length = 119 Score = 185 bits (450), Expect = 9e-47 Identities = 93/116 (80%), Positives = 99/116 (85%), Gaps = 1/116 (0%) Frame = +2 Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304 KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63 Query: 305 TTRKTPCGEGSKTXDRFQMXIHXXVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 472 TTRKTPCGEGSKT DRFQM IH +IDLHSPSEIVKQITSI+IEPGV VEVTIADA Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119 >BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20 protein. Length = 119 Score = 185 bits (450), Expect = 9e-47 Identities = 93/116 (80%), Positives = 99/116 (85%), Gaps = 1/116 (0%) Frame = +2 Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304 KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63 Query: 305 TTRKTPCGEGSKTXDRFQMXIHXXVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 472 TTRKTPCGEGSKT DRFQM IH +IDLHSPSEIVKQITSI+IEPGV VEVTIADA Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119 >AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20 protein. Length = 119 Score = 185 bits (450), Expect = 9e-47 Identities = 93/116 (80%), Positives = 99/116 (85%), Gaps = 1/116 (0%) Frame = +2 Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304 KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63 Query: 305 TTRKTPCGEGSKTXDRFQMXIHXXVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 472 TTRKTPCGEGSKT DRFQM IH +IDLHSPSEIVKQITSI+IEPGV VEVTIADA Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119 >AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20 protein. Length = 60 Score = 113 bits (272), Expect = 3e-25 Identities = 53/60 (88%), Positives = 55/60 (91%) Frame = +2 Query: 266 KGPVRMPTKILRITTRKTPCGEGSKTXDRFQMXIHXXVIDLHSPSEIVKQITSINIEPGV 445 KGPVRMPTK LRITTRKTPCGEGSKT DRFQM IH +IDLHSPSEIVKQITSI+IEPGV Sbjct: 1 KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGV 60 >AK128833-1|BAC87633.1| 286|Homo sapiens protein ( Homo sapiens cDNA FLJ46328 fis, clone TESTI4044291. ). Length = 286 Score = 29.5 bits (63), Expect = 7.1 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3 Query: 108 QPLXCQAKTLRNPRQRSPLSTASGSLLLH 194 QPL + +L P QR PLST + S LH Sbjct: 95 QPLHRHSGSLSPPAQRQPLSTCTASASLH 123 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 72,113,561 Number of Sequences: 237096 Number of extensions: 1545956 Number of successful extensions: 6689 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6580 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6689 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 4706589866 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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