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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_I23
         (506 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20 pro...   185   9e-47
BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20 p...   185   9e-47
BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20 p...   185   9e-47
AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20 p...   185   9e-47
AB007156-1|BAA25820.1|   60|Homo sapiens ribosomal protein S20 p...   113   3e-25
AK128833-1|BAC87633.1|  286|Homo sapiens protein ( Homo sapiens ...    29   7.1  

>L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  185 bits (450), Expect = 9e-47
 Identities = 93/116 (80%), Positives = 99/116 (85%), Gaps = 1/116 (0%)
 Frame = +2

Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 305 TTRKTPCGEGSKTXDRFQMXIHXXVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 472
           TTRKTPCGEGSKT DRFQM IH  +IDLHSPSEIVKQITSI+IEPGV VEVTIADA
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  185 bits (450), Expect = 9e-47
 Identities = 93/116 (80%), Positives = 99/116 (85%), Gaps = 1/116 (0%)
 Frame = +2

Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 305 TTRKTPCGEGSKTXDRFQMXIHXXVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 472
           TTRKTPCGEGSKT DRFQM IH  +IDLHSPSEIVKQITSI+IEPGV VEVTIADA
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  185 bits (450), Expect = 9e-47
 Identities = 93/116 (80%), Positives = 99/116 (85%), Gaps = 1/116 (0%)
 Frame = +2

Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 305 TTRKTPCGEGSKTXDRFQMXIHXXVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 472
           TTRKTPCGEGSKT DRFQM IH  +IDLHSPSEIVKQITSI+IEPGV VEVTIADA
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  185 bits (450), Expect = 9e-47
 Identities = 93/116 (80%), Positives = 99/116 (85%), Gaps = 1/116 (0%)
 Frame = +2

Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 305 TTRKTPCGEGSKTXDRFQMXIHXXVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 472
           TTRKTPCGEGSKT DRFQM IH  +IDLHSPSEIVKQITSI+IEPGV VEVTIADA
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>AB007156-1|BAA25820.1|   60|Homo sapiens ribosomal protein S20
           protein.
          Length = 60

 Score =  113 bits (272), Expect = 3e-25
 Identities = 53/60 (88%), Positives = 55/60 (91%)
 Frame = +2

Query: 266 KGPVRMPTKILRITTRKTPCGEGSKTXDRFQMXIHXXVIDLHSPSEIVKQITSINIEPGV 445
           KGPVRMPTK LRITTRKTPCGEGSKT DRFQM IH  +IDLHSPSEIVKQITSI+IEPGV
Sbjct: 1   KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGV 60


>AK128833-1|BAC87633.1|  286|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46328 fis, clone TESTI4044291. ).
          Length = 286

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 108 QPLXCQAKTLRNPRQRSPLSTASGSLLLH 194
           QPL   + +L  P QR PLST + S  LH
Sbjct: 95  QPLHRHSGSLSPPAQRQPLSTCTASASLH 123


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,113,561
Number of Sequences: 237096
Number of extensions: 1545956
Number of successful extensions: 6689
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6689
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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