BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P04_F_I21 (442 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g56670.1 68418.m07074 40S ribosomal protein S30 (RPS30C) 78 2e-15 At4g29390.1 68417.m04198 40S ribosomal protein S30 (RPS30B) RIBO... 78 2e-15 At2g19750.1 68415.m02307 40S ribosomal protein S30 (RPS30A) 78 2e-15 At3g47500.1 68416.m05166 Dof-type zinc finger domain-containing ... 28 3.2 At3g26200.1 68416.m03269 cytochrome P450 71B22, putative (CYP71B... 28 3.2 At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 27 4.2 At2g31340.1 68415.m03825 expressed protein 26 9.8 >At5g56670.1 68418.m07074 40S ribosomal protein S30 (RPS30C) Length = 62 Score = 78.2 bits (184), Expect = 2e-15 Identities = 36/59 (61%), Positives = 43/59 (72%) Frame = +3 Query: 252 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRXIQYNRRFVNVVQTFGRRRGPNSN 428 GKVHGSLARAGKV+GQTPKV GRA + +Q+NRRFV V FG++RGPNS+ Sbjct: 2 GKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNSS 60 >At4g29390.1 68417.m04198 40S ribosomal protein S30 (RPS30B) RIBOSOMAL PROTEIN S30 - Arabidopsis thaliana,PID:e1358183 Length = 62 Score = 78.2 bits (184), Expect = 2e-15 Identities = 36/59 (61%), Positives = 43/59 (72%) Frame = +3 Query: 252 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRXIQYNRRFVNVVQTFGRRRGPNSN 428 GKVHGSLARAGKV+GQTPKV GRA + +Q+NRRFV V FG++RGPNS+ Sbjct: 2 GKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNSS 60 >At2g19750.1 68415.m02307 40S ribosomal protein S30 (RPS30A) Length = 62 Score = 78.2 bits (184), Expect = 2e-15 Identities = 36/59 (61%), Positives = 43/59 (72%) Frame = +3 Query: 252 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRXIQYNRRFVNVVQTFGRRRGPNSN 428 GKVHGSLARAGKV+GQTPKV GRA + +Q+NRRFV V FG++RGPNS+ Sbjct: 2 GKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNSS 60 >At3g47500.1 68416.m05166 Dof-type zinc finger domain-containing protein identical to H-protein promoter binding factor-2a GI:3386546 from [Arabidopsis thaliana] Length = 448 Score = 27.9 bits (59), Expect = 3.2 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +2 Query: 287 SQRTNPQSGKTTKKXEEXWPC*AXNSVQQKIC 382 +Q+T P GKT KK + PC S++ K C Sbjct: 93 NQQTTPD-GKTLKKPTKILPCPRCKSMETKFC 123 >At3g26200.1 68416.m03269 cytochrome P450 71B22, putative (CYP71B22) Identical to cytochrome P450 71B22 (SP:Q9LTM1)[Arabidopsis thaliana];contains Pfam profile: PF00067 cytochrome P450 Length = 500 Score = 27.9 bits (59), Expect = 3.2 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%) Frame = -3 Query: 161 SKVFIANCSKS--TNAFLDLTNGLLAIDVQDVCRLPSDMQLHSC 36 S+V + SKS T +DL L + VCRL H C Sbjct: 148 SEVLVNKLSKSAETRTMVDLRKALFSYTASIVCRLAFGQNFHEC 191 >At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related contains Pfam PF02138: Beige/BEACH domain; contains Pfam PF00400: WD domain, G-beta repeat (3 copies) Length = 2946 Score = 27.5 bits (58), Expect = 4.2 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +3 Query: 51 HIRGQSTHVLDVNGQESIGQIKERIRTLAAVGD 149 H+R QS N S +K+R TL A+G+ Sbjct: 1385 HLRSQSKQTCATNAVASPSPLKKRTSTLTAIGE 1417 >At2g31340.1 68415.m03825 expressed protein Length = 559 Score = 26.2 bits (55), Expect = 9.8 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = -1 Query: 97 SWPLTSRTCVDCPLICNC 44 S+P TS T VD PL+ NC Sbjct: 79 SYPWTSWTSVDPPLLSNC 96 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,754,775 Number of Sequences: 28952 Number of extensions: 148919 Number of successful extensions: 398 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 395 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 398 length of database: 12,070,560 effective HSP length: 75 effective length of database: 9,899,160 effective search space used: 702840360 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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