Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_I19
         (387 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT007293-1|AAP35957.1|   51|Homo sapiens ATP synthase, H+ transp...    49   6e-06
BC105811-1|AAI05812.1|   51|Homo sapiens ATP5E protein protein.        49   6e-06
BC003671-1|AAH03671.1|   51|Homo sapiens ATP synthase, H+ transp...    49   6e-06
BC001690-1|AAH01690.1|   51|Homo sapiens ATP synthase, H+ transp...    49   6e-06
AL591024-1|CAH70632.1|   51|Homo sapiens protein ( Human DNA seq...    49   6e-06
AL109840-12|CAC09372.1|   51|Homo sapiens ATP synthase, H+ trans...    49   6e-06
AF052955-1|AAF72736.1|   51|Homo sapiens F1-ATPase epsilon-subun...    49   6e-06
AK125993-1|BAC86382.1|  233|Homo sapiens protein ( Homo sapiens ...    29   6.9  

>BT007293-1|AAP35957.1|   51|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, epsilon subunit
           protein.
          Length = 51

 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +1

Query: 88  WRQAGLTYINYSNIAAXVLRRSLKQEFRAXALKRDESHVRV 210
           WRQAGL+YI YS I A  +R +LK EF+A A K   S+V++
Sbjct: 5   WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45


>BC105811-1|AAI05812.1|   51|Homo sapiens ATP5E protein protein.
          Length = 51

 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +1

Query: 88  WRQAGLTYINYSNIAAXVLRRSLKQEFRAXALKRDESHVRV 210
           WRQAGL+YI YS I A  +R +LK EF+A A K   S+V++
Sbjct: 5   WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45


>BC003671-1|AAH03671.1|   51|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, epsilon subunit
           protein.
          Length = 51

 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +1

Query: 88  WRQAGLTYINYSNIAAXVLRRSLKQEFRAXALKRDESHVRV 210
           WRQAGL+YI YS I A  +R +LK EF+A A K   S+V++
Sbjct: 5   WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45


>BC001690-1|AAH01690.1|   51|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, epsilon subunit
           protein.
          Length = 51

 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +1

Query: 88  WRQAGLTYINYSNIAAXVLRRSLKQEFRAXALKRDESHVRV 210
           WRQAGL+YI YS I A  +R +LK EF+A A K   S+V++
Sbjct: 5   WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45


>AL591024-1|CAH70632.1|   51|Homo sapiens protein ( Human DNA
           sequence from clone RP11-153M24 on chromosome 13
           Contains a novel gene similar to ATP synthase (H+
           transporting, mitochondrialnase, an).
          Length = 51

 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +1

Query: 88  WRQAGLTYINYSNIAAXVLRRSLKQEFRAXALKRDESHVRV 210
           WRQAGL+YI YS I A V+R +LK EF+A A K   + V++
Sbjct: 5   WRQAGLSYIRYSQICAKVVRDALKTEFKANAKKTSGNSVKI 45


>AL109840-12|CAC09372.1|   51|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, epsilon subunit
           protein.
          Length = 51

 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +1

Query: 88  WRQAGLTYINYSNIAAXVLRRSLKQEFRAXALKRDESHVRV 210
           WRQAGL+YI YS I A  +R +LK EF+A A K   S+V++
Sbjct: 5   WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45


>AF052955-1|AAF72736.1|   51|Homo sapiens F1-ATPase epsilon-subunit
           protein.
          Length = 51

 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +1

Query: 88  WRQAGLTYINYSNIAAXVLRRSLKQEFRAXALKRDESHVRV 210
           WRQAGL+YI YS I A  +R +LK EF+A A K   S+V++
Sbjct: 5   WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45


>AK125993-1|BAC86382.1|  233|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44005 fis, clone TESTI4023555. ).
          Length = 233

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 136 WLRCLSSLCKLNQLASKRSFCYCSLFTFIRQ 44
           WL+ L S+   +  A K   CYC +FTFI Q
Sbjct: 180 WLK-LPSIGAASCTAQKPFLCYCGVFTFIFQ 209


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,772,941
Number of Sequences: 237096
Number of extensions: 803276
Number of successful extensions: 1401
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1401
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)