Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_I17
(648 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P47985 Cluster: Ubiquinol-cytochrome c reductase iron-s... 140 3e-32
UniRef50_Q6NR57 Cluster: RH01528p; n=2; Drosophila melanogaster|... 134 1e-30
UniRef50_Q6PBC5 Cluster: Ubiquinol-cytochrome c reductase, Riesk... 134 2e-30
UniRef50_UPI00015B498B Cluster: PREDICTED: similar to Rieske iro... 130 3e-29
UniRef50_UPI00003C051F Cluster: PREDICTED: similar to ubiquinol-... 125 8e-28
UniRef50_Q86DZ7 Cluster: Clone ZZZ383 mRNA sequence; n=1; Schist... 110 3e-23
UniRef50_A2I471 Cluster: Putative ubiquinol-cytochrome c reducta... 108 1e-22
UniRef50_O44512 Cluster: Iron-sulfur protein protein 1; n=2; Cae... 103 4e-21
UniRef50_A4D1R5 Cluster: Similar to Ubiquinol-cytochrome C reduc... 99 8e-20
UniRef50_P08067 Cluster: Ubiquinol-cytochrome c reductase iron-s... 87 3e-16
UniRef50_UPI0000DB7A10 Cluster: PREDICTED: similar to Ubiquinol-... 86 6e-16
UniRef50_Q9SMH6 Cluster: Ubiquinol-cytochrome C reductase iron-s... 85 2e-15
UniRef50_Q54NW9 Cluster: Putative uncharacterized protein; n=1; ... 80 4e-14
UniRef50_UPI00015B4B8F Cluster: PREDICTED: similar to ubiquinol-... 73 5e-12
UniRef50_P49727 Cluster: Ubiquinol-cytochrome c reductase iron-s... 71 3e-11
UniRef50_Q8HEB4 Cluster: Ubiquinol-cytochrome c reductase; n=3; ... 70 6e-11
UniRef50_P23136 Cluster: Ubiquinol-cytochrome c reductase iron-s... 64 2e-09
UniRef50_Q0LZN8 Cluster: Twin-arginine translocation pathway sig... 62 1e-08
UniRef50_Q92IR2 Cluster: Ubiquinol-cytochrome c reductase iron-s... 62 1e-08
UniRef50_A5CED6 Cluster: Ubiquinol-cytochrome c reductase, iron-... 60 3e-08
UniRef50_A3VTP4 Cluster: Probable ubiquinol-cytochrome c reducta... 60 3e-08
UniRef50_Q5GSN0 Cluster: Rieske Fe-S protein; n=11; Rickettsiale... 60 6e-08
UniRef50_A3XEG0 Cluster: Ubiquinol-cytochrome c reductase, iron-... 59 1e-07
UniRef50_A0L4J1 Cluster: Ubiquinol-cytochrome c reductase, iron-... 58 2e-07
UniRef50_P05417 Cluster: Ubiquinol-cytochrome c reductase iron-s... 54 2e-06
UniRef50_A3W7X8 Cluster: Ubiquinol-cytochrome c reductase, iron-... 54 4e-06
UniRef50_Q5NNY0 Cluster: Ubiquinol-cytochrome-c reductase; n=5; ... 52 2e-05
UniRef50_Q4XP00 Cluster: Ubiquinol cytochrome c oxidoreductase, ... 48 1e-04
UniRef50_Q0F3L7 Cluster: Ubiquinol-cytochrome c reductase, iron-... 48 3e-04
UniRef50_A3WEQ8 Cluster: Ubiquinol-cytochrome-c reductase; n=1; ... 40 0.052
UniRef50_Q7NQX7 Cluster: Ubiquinol-cytochrome c reductase; n=4; ... 37 0.48
UniRef50_A0D3T1 Cluster: Chromosome undetermined scaffold_37, wh... 37 0.48
UniRef50_Q4FWW6 Cluster: Reiske iron-sulfur protein, putative; n... 36 0.64
UniRef50_Q7W080 Cluster: Ubiquinol-cytochrome C reductase iron-s... 36 0.84
UniRef50_Q5FTF3 Cluster: Ubiquinol-cytochrome C reductase iron-s... 36 0.84
UniRef50_Q57456 Cluster: Slr0351 protein; n=2; Chroococcales|Rep... 36 1.1
UniRef50_O31214 Cluster: Ubiquinol-cytochrome c reductase iron-s... 36 1.1
UniRef50_Q8DLR1 Cluster: Tlr0417 protein; n=1; Synechococcus elo... 35 2.0
UniRef50_Q19X65 Cluster: Gp232; n=2; unclassified Myoviridae|Rep... 35 2.0
UniRef50_Q63QA2 Cluster: Ubiquinol-cytochrome c reductase iron-s... 34 2.6
UniRef50_Q5E2N1 Cluster: Ubiquinol-cytochrome c reductase iron-s... 34 2.6
UniRef50_UPI00015C5770 Cluster: hypothetical protein CKO_01263; ... 34 3.4
UniRef50_A2SGV1 Cluster: Ubiquinol--cytochrome c reductase; n=1;... 34 3.4
UniRef50_Q7UJF4 Cluster: Protoheme IX farnesyltransferase; n=1; ... 33 6.0
UniRef50_P51767 Cluster: Baseplate assembly protein J; n=11; roo... 33 6.0
>UniRef50_P47985 Cluster: Ubiquinol-cytochrome c reductase
iron-sulfur subunit, mitochondrial precursor; n=50;
Coelomata|Rep: Ubiquinol-cytochrome c reductase
iron-sulfur subunit, mitochondrial precursor - Homo
sapiens (Human)
Length = 274
Score = 140 bits (339), Expect = 3e-32
Identities = 68/134 (50%), Positives = 84/134 (62%)
Frame = +2
Query: 245 RALKVKAGTXVPAQVRFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXX 424
R L G VPA V ++HTDI PDFS YRR E D T + E+ + R+ F+YL+
Sbjct: 62 RPLVASVGLNVPASVCYSHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVT 121
Query: 425 XXXXXXXXXXXXTHFVSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTA 604
T FVSSMSA+ADVLALAKIEI L++IP+GK++ FKWRGKPLF+RHRT
Sbjct: 122 TVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQ 181
Query: 605 XEISTXKAVPVDTL 646
EI AV + L
Sbjct: 182 KEIEQEAAVELSQL 195
>UniRef50_Q6NR57 Cluster: RH01528p; n=2; Drosophila
melanogaster|Rep: RH01528p - Drosophila melanogaster
(Fruit fly)
Length = 260
Score = 134 bits (325), Expect = 1e-30
Identities = 64/119 (53%), Positives = 83/119 (69%)
Frame = +2
Query: 290 RFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHF 469
R AHTD+ PDFSAYRR+ +D + + N+T +ER++F+YL+ F
Sbjct: 34 RQAHTDLQVPDFSAYRRESVKD-SRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTF 92
Query: 470 VSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
+ SMSA+A+VLA+AKIEI L++IP+GKSVTFKWRGKPLFIRH TA EI T + VP TL
Sbjct: 93 IGSMSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHSTAAEIETERNVPTSTL 151
>UniRef50_Q6PBC5 Cluster: Ubiquinol-cytochrome c reductase, Rieske
iron-sulfur polypeptide 1; n=10; Eumetazoa|Rep:
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur
polypeptide 1 - Xenopus tropicalis (Western clawed frog)
(Silurana tropicalis)
Length = 273
Score = 134 bits (323), Expect = 2e-30
Identities = 64/132 (48%), Positives = 83/132 (62%)
Frame = +2
Query: 251 LKVKAGTXVPAQVRFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXX 430
L AG A VRF H+D++ PDFS YRR E D T + + D R+SF+YL+
Sbjct: 63 LSASAGINGAACVRFLHSDVTVPDFSDYRRPEVLDSTKSSQTSSDSRKSFSYLVTGVTAV 122
Query: 431 XXXXXXXXXXTHFVSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXE 610
T FV+SMSA+ADVLA++KIEI L++IP+GK++ FKWRGKPLF+RHRTA E
Sbjct: 123 ATAYAAKNAVTQFVTSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTAKE 182
Query: 611 ISTXKAVPVDTL 646
I V + L
Sbjct: 183 IDQEAQVNLTDL 194
Score = 34.7 bits (76), Expect = 2.0
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 70 MNSVVRAGHLAPYFKSSTQVVANSLKPLVVVPTPSEKTVVLPLPKTSTV-ETLHGSLPIQ 246
++ R+G +APY +++ VA LKPLV V+L + K E+L+G P
Sbjct: 2 LSLATRSGSVAPYLSATSYAVAGQLKPLVSGVVLQADKVLLDVKKPFLCRESLNGQAPNG 61
Query: 247 GFEGQSR-NXSTC 282
G + N + C
Sbjct: 62 GLSASAGINGAAC 74
>UniRef50_UPI00015B498B Cluster: PREDICTED: similar to Rieske
iron-sulfur protein 1; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Rieske iron-sulfur protein 1 -
Nasonia vitripennis
Length = 275
Score = 130 bits (314), Expect = 3e-29
Identities = 66/154 (42%), Positives = 93/154 (60%), Gaps = 3/154 (1%)
Frame = +2
Query: 194 PCQKLQLWKLCMDPCRFRALKVKAGTXVPAQV---RFAHTDISYPDFSAYRRKETQDPTS 364
P Q+ + L D A++V +G V +Q+ R AHTDI PDF+ YR+ E ++P+
Sbjct: 44 PIQRTLNYTLSQDLHLNGAIRVSSGIAVSSQITQQRLAHTDIRVPDFNEYRKDEVKNPSV 103
Query: 365 KANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHFVSSMSAAADVLALAKIEIXLAEIPQ 544
++ E+ RQ+ +Y++ +S+M+A+ADVLA+AKIE+ L IP+
Sbjct: 104 RSRESAPSRQAVSYVVAASAGVIGAYTAKSFVIDLLSTMAASADVLAMAKIEVKLDAIPE 163
Query: 545 GKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
GKSV FKWRGKPLFIRHRTA EI AV V +L
Sbjct: 164 GKSVVFKWRGKPLFIRHRTAAEIERENAVDVASL 197
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 70 MNSVVRAGHLAPYFKSSTQVVANSLKPLVVVPTPSEKTVVLPLPKTSTVE-TLHGSLPIQ 246
MN + ++ +AP+ K++ V++ +KP+ S K + LP P T+ TL L +
Sbjct: 1 MNVITKSSSIAPFAKAAINVISTGVKPVRSNSKISRKKITLPSPIQRTLNYTLSQDLHLN 60
Query: 247 G 249
G
Sbjct: 61 G 61
>UniRef50_UPI00003C051F Cluster: PREDICTED: similar to
ubiquinol-cytochrome c reductase, Rieske iron-sulfur
polypeptide 1; n=1; Apis mellifera|Rep: PREDICTED:
similar to ubiquinol-cytochrome c reductase, Rieske
iron-sulfur polypeptide 1 - Apis mellifera
Length = 274
Score = 125 bits (302), Expect = 8e-28
Identities = 63/136 (46%), Positives = 81/136 (59%), Gaps = 3/136 (2%)
Frame = +2
Query: 248 ALKVKAG---TXVPAQVRFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXX 418
AL+V +G + + Q R AHTDI +PDFS YR + QDP SK+ E R+SF Y++
Sbjct: 60 ALRVSSGIGASLLATQRRLAHTDIQWPDFSDYRHEAVQDPRSKSKENSSSRKSFAYVMTA 119
Query: 419 XXXXXXXXXXXXXXTHFVSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHR 598
V++ SA+ADVLALAKIEI L IP+GKS FKWRGKP+F+RHR
Sbjct: 120 ASGITGAYIAKSAIHDLVATFSASADVLALAKIEIKLDAIPEGKSAVFKWRGKPIFVRHR 179
Query: 599 TAXEISTXKAVPVDTL 646
+ EI AV + L
Sbjct: 180 SKKEIEKEAAVDIKIL 195
>UniRef50_Q86DZ7 Cluster: Clone ZZZ383 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZZ383 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 253
Score = 110 bits (264), Expect = 3e-23
Identities = 52/124 (41%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Frame = +2
Query: 278 PAQVRFAHTDIS-YPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXX 454
P Q+RFAHTD++ PDF+ YR T+DP S+A +T +R+ FTY +
Sbjct: 67 PMQIRFAHTDVTNVPDFTNYRVDSTKDPHSRAADTDLQRKVFTYTMMFAATVIATTSAKY 126
Query: 455 XXTHFVSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVP 634
F+ + + +A A E+ LA IP+GK++T KWR KPLFIRHR+A EI+ +AVP
Sbjct: 127 TIKTFIKPLGPSTRTMAEASTEVNLAAIPEGKNITVKWRNKPLFIRHRSAEEIARERAVP 186
Query: 635 VDTL 646
+ +L
Sbjct: 187 LTSL 190
>UniRef50_A2I471 Cluster: Putative ubiquinol-cytochrome c reductase,
Rieske iron-sulfur polypeptide 1; n=1; Maconellicoccus
hirsutus|Rep: Putative ubiquinol-cytochrome c reductase,
Rieske iron-sulfur polypeptide 1 - Maconellicoccus
hirsutus (hibiscus mealybug)
Length = 276
Score = 108 bits (259), Expect = 1e-22
Identities = 49/131 (37%), Positives = 70/131 (53%)
Frame = +2
Query: 254 KVKAGTXVPAQVRFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXX 433
+V G Q RF+HTD+ PD++ YRRK +DP+ + E+ D R++FTY+
Sbjct: 66 RVINGITTKQQFRFSHTDVRIPDYTVYRRKSCRDPSVPSKESADGRKAFTYVFTAGTIAF 125
Query: 434 XXXXXXXXXTHFVSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEI 613
T V D LA +E+ ++ +P GKSVTFKWR KPLF++HRT EI
Sbjct: 126 ASVAAKTAVTKVVKYYGYNQDSLATGILELDISSVPVGKSVTFKWRNKPLFVKHRTPAEI 185
Query: 614 STXKAVPVDTL 646
+ P+ L
Sbjct: 186 QDSQNTPLSDL 196
>UniRef50_O44512 Cluster: Iron-sulfur protein protein 1; n=2;
Caenorhabditis|Rep: Iron-sulfur protein protein 1 -
Caenorhabditis elegans
Length = 276
Score = 103 bits (247), Expect = 4e-21
Identities = 53/120 (44%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
Frame = +2
Query: 290 RFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSF-TYLIXXXXXXXXXXXXXXXXTH 466
R AHTD+++PD S YRR T++ A +T D+R++ T L
Sbjct: 77 RLAHTDVTFPDMSNYRRDSTKNTQVPARDTEDQRRALPTALYYGAGGVLSLWAGKEVVQT 136
Query: 467 FVSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
VS + AAD ALA IEI +A+IP+GK+ TF+WRGKP+F++HRT EI+ KAVPV L
Sbjct: 137 LVSYKAMAADQRALASIEINMADIPEGKTKTFEWRGKPVFVKHRTKAEIAKEKAVPVADL 196
>UniRef50_A4D1R5 Cluster: Similar to Ubiquinol-cytochrome C
reductase iron-sulfur subunit, mitochondrial; n=1; Homo
sapiens|Rep: Similar to Ubiquinol-cytochrome C reductase
iron-sulfur subunit, mitochondrial - Homo sapiens
(Human)
Length = 282
Score = 99.1 bits (236), Expect = 8e-20
Identities = 54/139 (38%), Positives = 78/139 (56%), Gaps = 4/139 (2%)
Frame = +2
Query: 185 SSCPCQKLQLWKLCMDPCRFRALKVK----AGTXVPAQVRFAHTDISYPDFSAYRRKETQ 352
++C Q+ L LC + +A+ + G VPA VR++HTDI+ PDF Y E
Sbjct: 103 AACAVQEQPL--LCQESLSGQAMSLSWVNSVGLNVPASVRYSHTDINVPDFPDYCCIEIF 160
Query: 353 DPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHFVSSMSAAADVLALAKIEIXLA 532
D T + E + R+ F+YL+ + FVSS+SA+AD A++KI I L
Sbjct: 161 DGTKSSKEDGEARKGFSYLVTATTAVGVTYAAKNVISQFVSSISASADESAVSKIAIKLF 220
Query: 533 EIPQGKSVTFKWRGKPLFI 589
+IP+GK++ FKWRGK LFI
Sbjct: 221 DIPEGKNMAFKWRGKSLFI 239
>UniRef50_P08067 Cluster: Ubiquinol-cytochrome c reductase
iron-sulfur subunit, mitochondrial precursor; n=35;
cellular organisms|Rep: Ubiquinol-cytochrome c reductase
iron-sulfur subunit, mitochondrial precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 215
Score = 87.4 bits (207), Expect = 3e-16
Identities = 44/107 (41%), Positives = 58/107 (54%)
Frame = +2
Query: 326 SAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHFVSSMSAAADVLA 505
S YR D K N D+ +S+ Y + F+SSM+A ADVLA
Sbjct: 32 STYRTPNFDD-VLKENNDADKGRSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLA 90
Query: 506 LAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
+AK+E+ LA IP GK+V KW+GKP+FIRHRT EI +V + L
Sbjct: 91 MAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSAL 137
>UniRef50_UPI0000DB7A10 Cluster: PREDICTED: similar to
Ubiquinol-cytochrome c reductase iron-sulfur subunit,
mitochondrial precursor (Rieske iron-sulfur protein)
(RISP) (Liver regeneration-related protein LRRGT00195);
n=1; Apis mellifera|Rep: PREDICTED: similar to
Ubiquinol-cytochrome c reductase iron-sulfur subunit,
mitochondrial precursor (Rieske iron-sulfur protein)
(RISP) (Liver regeneration-related protein LRRGT00195) -
Apis mellifera
Length = 228
Score = 86.2 bits (204), Expect = 6e-16
Identities = 41/119 (34%), Positives = 61/119 (51%)
Frame = +2
Query: 290 RFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHF 469
R+AHTD+ PDF YRRK + A + DER++ Y H+
Sbjct: 30 RYAHTDLPKPDFQEYRRKSLLNSNISAKRSTDERRTANYAASFVAGVAALYGLKSHILHY 89
Query: 470 VSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
+ ++ + +LA A+IEI L +IP GK FKW+GKP+F+ HR+ I + V + L
Sbjct: 90 IFFLAPSRGILAEAQIEISLRDIPVGKVSIFKWQGKPIFVYHRSQSIIDQERLVNIAEL 148
>UniRef50_Q9SMH6 Cluster: Ubiquinol-cytochrome C reductase
iron-sulfur subunit precursor; n=1; Cyanophora
paradoxa|Rep: Ubiquinol-cytochrome C reductase
iron-sulfur subunit precursor - Cyanophora paradoxa
Length = 225
Score = 84.6 bits (200), Expect = 2e-15
Identities = 41/112 (36%), Positives = 62/112 (55%)
Frame = +2
Query: 311 SYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHFVSSMSAA 490
+Y + S+ + + + + R+ F YL+ +S+MSA+
Sbjct: 35 AYSELSSVPLYQQEKKIERFTPGDENRRPFAYLVIGSARFAYMAWTRVAVLKVISTMSAS 94
Query: 491 ADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
ADVLALA +E+ ++ IP G++VT KWRGKP+FIRHRTA EI+ AV + L
Sbjct: 95 ADVLALASVEVDVSSIPVGQNVTIKWRGKPVFIRHRTAAEIAEAGAVNISEL 146
>UniRef50_Q54NW9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 204
Score = 80.2 bits (189), Expect = 4e-14
Identities = 38/95 (40%), Positives = 54/95 (56%)
Frame = +2
Query: 362 SKANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHFVSSMSAAADVLALAKIEIXLAEIP 541
++ NE E + F YL+ +S+MS D+LAL+ +E+ L+ IP
Sbjct: 29 AEKNEVDPENRGFAYLVVGGAGAGLAAIAKNTVVTALSTMSPGQDILALSSVEVDLSGIP 88
Query: 542 QGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
+ +V KWRGKPLFIRHR+A EIS +AV + TL
Sbjct: 89 ESTAVVVKWRGKPLFIRHRSAEEISESQAVQLSTL 123
>UniRef50_UPI00015B4B8F Cluster: PREDICTED: similar to
ubiquinol-cytochrome c oxidoreductase subunit 9 and
Rieske iron sulfur protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to
ubiquinol-cytochrome c oxidoreductase subunit 9 and
Rieske iron sulfur protein - Nasonia vitripennis
Length = 236
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/113 (31%), Positives = 57/113 (50%)
Frame = +2
Query: 299 HTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHFVSS 478
H D P+F R+ T++P K +E+ DER+ YL + +
Sbjct: 41 HGDYPKPEFDELRKDSTKNPCVKNSESADERKVAAYLPTFVAGVAGLYASKAIIHQHLMT 100
Query: 479 MSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPV 637
M+ + DVLA AK E+ +A IP+ K KW+G+P+FI HR+ I +A+ +
Sbjct: 101 MAPSRDVLAAAKTEVNIANIPENKVQIIKWQGRPVFIYHRSQELIDQERAMNI 153
>UniRef50_P49727 Cluster: Ubiquinol-cytochrome c reductase
iron-sulfur subunit, mitochondrial precursor; n=33;
cellular organisms|Rep: Ubiquinol-cytochrome c reductase
iron-sulfur subunit, mitochondrial precursor - Zea mays
(Maize)
Length = 273
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/86 (40%), Positives = 48/86 (55%)
Frame = +2
Query: 389 RQSFTYLIXXXXXXXXXXXXXXXXTHFVSSMSAAADVLALAKIEIXLAEIPQGKSVTFKW 568
+++F Y + FV SMSA+ DVLALA +E+ L+ I G +VT KW
Sbjct: 109 KRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKW 168
Query: 569 RGKPLFIRHRTAXEISTXKAVPVDTL 646
RGKP+FIR RT +I +V V +L
Sbjct: 169 RGKPVFIRRRTEDDIKLANSVDVASL 194
>UniRef50_Q8HEB4 Cluster: Ubiquinol-cytochrome c reductase; n=3;
Chlamydomonas|Rep: Ubiquinol-cytochrome c reductase -
Chlamydomonas reinhardtii
Length = 262
Score = 69.7 bits (163), Expect = 6e-11
Identities = 32/87 (36%), Positives = 47/87 (54%)
Frame = +2
Query: 386 ERQSFTYLIXXXXXXXXXXXXXXXXTHFVSSMSAAADVLALAKIEIXLAEIPQGKSVTFK 565
E + F Y + V S+SAAAD +AL+ +E+ L+ + +G ++T K
Sbjct: 97 EGRPFAYFVQTGGRFLYASAARLAVLKIVMSLSAAADTMALSSLEVDLSGVEEGTTITVK 156
Query: 566 WRGKPLFIRHRTAXEISTXKAVPVDTL 646
WRGKP+FIRHRT EI+ V + L
Sbjct: 157 WRGKPVFIRHRTDAEIAQSAEVALSEL 183
>UniRef50_P23136 Cluster: Ubiquinol-cytochrome c reductase
iron-sulfur subunit; n=29; Alphaproteobacteria|Rep:
Ubiquinol-cytochrome c reductase iron-sulfur subunit -
Rhodospirillum rubrum
Length = 183
Score = 64.5 bits (150), Expect = 2e-09
Identities = 27/55 (49%), Positives = 39/55 (70%)
Frame = +2
Query: 467 FVSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAV 631
F+ M+ AAD LALA E+ ++ I +G+++T WRGKP+F+RHRT EI +AV
Sbjct: 40 FIDFMNPAADTLALASTEVDVSAIAEGQAITVTWRGKPVFVRHRTQKEIVVARAV 94
>UniRef50_Q0LZN8 Cluster: Twin-arginine translocation pathway
signal:Ubiquinol-cytochrome c reductase, iron-sulfur
subunit; n=3; Alphaproteobacteria|Rep: Twin-arginine
translocation pathway signal:Ubiquinol-cytochrome c
reductase, iron-sulfur subunit - Caulobacter sp. K31
Length = 220
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = +2
Query: 467 FVSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDT 643
F+ M+ AAD ALA IE L ++ +G+ V KWRGKPLF+R+RT EI+ KAV D+
Sbjct: 80 FIDQMNPAADTRALASIEFDLGKVVEGQQVVVKWRGKPLFVRNRTKAEIA--KAVADDS 136
>UniRef50_Q92IR2 Cluster: Ubiquinol-cytochrome c reductase
iron-sulfur subunit; n=12; Bacteria|Rep:
Ubiquinol-cytochrome c reductase iron-sulfur subunit -
Rickettsia conorii
Length = 177
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/59 (47%), Positives = 43/59 (72%)
Frame = +2
Query: 470 VSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
V S++ +ADVLAL+ IE+ L+ I G++VT KW+GKP+FI +RT +I+ +AV + L
Sbjct: 38 VDSLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSEL 96
>UniRef50_A5CED6 Cluster: Ubiquinol-cytochrome c reductase,
iron-sulfur subunit; n=3; Alphaproteobacteria|Rep:
Ubiquinol-cytochrome c reductase, iron-sulfur subunit -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 230
Score = 60.5 bits (140), Expect = 3e-08
Identities = 25/60 (41%), Positives = 42/60 (70%)
Frame = +2
Query: 467 FVSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
F+ S++ AA+V AL+ +E+ + +I G+++T W+GKP+FI+HRT EI +AV + L
Sbjct: 90 FIDSLNPAANVSALSSVEVDIDKIQCGQAITISWQGKPVFIKHRTDEEIKEARAVNLSEL 149
>UniRef50_A3VTP4 Cluster: Probable ubiquinol-cytochrome c reductase
iron-sulfur subunit protein; n=1; Parvularcula
bermudensis HTCC2503|Rep: Probable ubiquinol-cytochrome
c reductase iron-sulfur subunit protein - Parvularcula
bermudensis HTCC2503
Length = 217
Score = 60.5 bits (140), Expect = 3e-08
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +2
Query: 299 HTDISYPDFSAYRRKETQDPTSKANETIDE-RQSFTYLIXXXXXXXXXXXXXXXXTHFVS 475
H+ D S + D T++ ++T DE R+ F +L+ H
Sbjct: 5 HSSCGERDLSTEELMSSTDNTAEVSDTPDEGRRDFIHLLASGTAAAAVVGIAIPVVH--- 61
Query: 476 SMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAV 631
M+ AADV ALA E+ LA + G+++ W+GKP+FIR T EI+ +A+
Sbjct: 62 QMNPAADVRALATKEVSLAGVEIGQAIKVMWQGKPVFIRRLTDAEIARAEAL 113
>UniRef50_Q5GSN0 Cluster: Rieske Fe-S protein; n=11;
Rickettsiales|Rep: Rieske Fe-S protein - Wolbachia sp.
subsp. Brugia malayi (strain TRS)
Length = 200
Score = 59.7 bits (138), Expect = 6e-08
Identities = 25/59 (42%), Positives = 40/59 (67%)
Frame = +2
Query: 470 VSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
+ SM+ +A+VLA++ +E+ L+ I +G + KW+GKP+FIR RT EI + V V+ L
Sbjct: 57 IKSMNPSAEVLAMSTVEVNLSGIQEGHGIKVKWQGKPVFIRRRTKQEIKAARVVNVEDL 115
>UniRef50_A3XEG0 Cluster: Ubiquinol-cytochrome c reductase,
iron-sulfur subunit; n=2; Rhodobacteraceae|Rep:
Ubiquinol-cytochrome c reductase, iron-sulfur subunit -
Roseobacter sp. MED193
Length = 111
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/56 (44%), Positives = 39/56 (69%)
Frame = +2
Query: 470 VSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPV 637
V+ M+ +ADV ALA+I + ++++ G +T WRGKP+FIRHRT E++ +A V
Sbjct: 33 VNQMNPSADVRALAQITVDISDLAPGTQLTVNWRGKPVFIRHRTEAEMAQARAEAV 88
>UniRef50_A0L4J1 Cluster: Ubiquinol-cytochrome c reductase,
iron-sulfur subunit; n=5; cellular organisms|Rep:
Ubiquinol-cytochrome c reductase, iron-sulfur subunit -
Magnetococcus sp. (strain MC-1)
Length = 178
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = +2
Query: 467 FVSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXK 625
F+ S S +ADVL+LA E+ +A I +G+ +T W+GKP+FI HR A +I K
Sbjct: 34 FIDSWSPSADVLSLATTEVSVAAIAEGQMITTMWQGKPVFILHRNAEQIERAK 86
>UniRef50_P05417 Cluster: Ubiquinol-cytochrome c reductase
iron-sulfur subunit; n=59; Alphaproteobacteria|Rep:
Ubiquinol-cytochrome c reductase iron-sulfur subunit -
Paracoccus denitrificans
Length = 190
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +2
Query: 470 VSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
V+ M+ +ADV ALA I++ ++ + G +T KW GKP+FIR RT EI + V + L
Sbjct: 39 VNQMNPSADVQALASIQVDVSGVETGTQLTVKWLGKPVFIRRRTEDEIQAGREVDLGQL 97
>UniRef50_A3W7X8 Cluster: Ubiquinol-cytochrome c reductase,
iron-sulfur subunit; n=4; Alphaproteobacteria|Rep:
Ubiquinol-cytochrome c reductase, iron-sulfur subunit -
Roseovarius sp. 217
Length = 200
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/102 (27%), Positives = 49/102 (48%)
Frame = +2
Query: 341 KETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHFVSSMSAAADVLALAKIE 520
++T D T + T ER+ F Y ++SM+ +ADV A +
Sbjct: 3 RQTSDETDQLPAT--ERRDFLYY---ATASTGAVAAGAAVWPLINSMNPSADVTASGTVR 57
Query: 521 IXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
+ L+ + G+ +T KW+G+P+F+ R+ I +AV +D L
Sbjct: 58 VDLSGVEPGQRITVKWQGRPVFVWRRSPAAIEAARAVDLDQL 99
>UniRef50_Q5NNY0 Cluster: Ubiquinol-cytochrome-c reductase; n=5;
Sphingomonadales|Rep: Ubiquinol-cytochrome-c reductase -
Zymomonas mobilis
Length = 210
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = +2
Query: 467 FVSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
F++ M+ + DV K E+ ++ +P G++V WR +P+FIRH T EI+ AV + L
Sbjct: 65 FIAQMNPSKDVSEQGKTEVDISTVPPGQTVKVVWRDQPVFIRHLTEQEITEANAVALSDL 124
>UniRef50_Q4XP00 Cluster: Ubiquinol cytochrome c oxidoreductase,
putative; n=8; Aconoidasida|Rep: Ubiquinol cytochrome c
oxidoreductase, putative - Plasmodium chabaudi
Length = 357
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +2
Query: 386 ERQSFTYLIXXXXXXXXXXXXXXXXTHFVSSMSAAADVLALAKIEIXLAEIPQGKSVTFK 565
+R++F Y I V + D++A E+ + + +G+ V K
Sbjct: 191 DRRTFMYFISASYFFIMSSIMRSTICKAVHFFWISKDLVAEGTTELDMRTVGEGEHVVIK 250
Query: 566 WRGKPLFIRHRTAXEISTXK 625
WRGKP+F++HRT +I +
Sbjct: 251 WRGKPIFVKHRTPEDIQRAR 270
>UniRef50_Q0F3L7 Cluster: Ubiquinol-cytochrome c reductase,
iron-sulfur subunit; n=1; Mariprofundus ferrooxydans
PV-1|Rep: Ubiquinol-cytochrome c reductase, iron-sulfur
subunit - Mariprofundus ferrooxydans PV-1
Length = 200
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +2
Query: 467 FVSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXK 625
FV SM AAD +A++ E L + G+ V W+GKP+F+ HRT +S K
Sbjct: 33 FVGSMMPAADTMAVSTTEFNLDTLVPGQLVVIAWQGKPVFVVHRTEPMLSRLK 85
>UniRef50_A3WEQ8 Cluster: Ubiquinol-cytochrome-c reductase; n=1;
Erythrobacter sp. NAP1|Rep: Ubiquinol-cytochrome-c
reductase - Erythrobacter sp. NAP1
Length = 182
Score = 39.9 bits (89), Expect = 0.052
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +2
Query: 470 VSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAV 631
+S M+ ADVLA + ++ ++ + G+S+ +R +PLF++ T EI A+
Sbjct: 38 ISQMAPTADVLAASTTDVDVSSLEPGQSIKAVFREQPLFVKRLTPEEIEEVNAI 91
>UniRef50_Q7NQX7 Cluster: Ubiquinol-cytochrome c reductase; n=4;
Proteobacteria|Rep: Ubiquinol-cytochrome c reductase -
Chromobacterium violaceum
Length = 194
Score = 36.7 bits (81), Expect = 0.48
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 467 FVSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEI 613
F+S + A A +E+ + +I G+ + +WRGKP++I RT +I
Sbjct: 34 FMSFFPSERAKAAGAPVEVDIGKIEAGQKINVEWRGKPVWILSRTPEQI 82
>UniRef50_A0D3T1 Cluster: Chromosome undetermined scaffold_37, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_37, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 260
Score = 36.7 bits (81), Expect = 0.48
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 515 IEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
+E+ + ++P G+ + W G P+FIR T EI +P +T+
Sbjct: 122 LEMDIGDLPPGEVMQIVWNGTPVFIRRLTQQEIKDEDNLPKETI 165
>UniRef50_Q4FWW6 Cluster: Reiske iron-sulfur protein, putative; n=7;
Trypanosomatidae|Rep: Reiske iron-sulfur protein,
putative - Leishmania major strain Friedlin
Length = 297
Score = 36.3 bits (80), Expect = 0.64
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 488 AADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
A ++ IE + E+ + + T WRGKP+F+ R+A ++ P+ L
Sbjct: 163 AMSMVGQMNIEAEVGELDERQCTTVVWRGKPVFVYRRSARQMKEVMETPLSAL 215
>UniRef50_Q7W080 Cluster: Ubiquinol-cytochrome C reductase
iron-sulfur subunit; n=24; Betaproteobacteria|Rep:
Ubiquinol-cytochrome C reductase iron-sulfur subunit -
Bordetella pertussis
Length = 213
Score = 35.9 bits (79), Expect = 0.84
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 467 FVSSMSAAADVLAL-AKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKA 628
FVS+ + + A A +E+ + ++ G+ T +WRGKP++I RT ++ K+
Sbjct: 46 FVSTFAPSEKARAAGAPVEVDVGDLAPGQMRTVEWRGKPVWIIRRTDDQLKGIKS 100
>UniRef50_Q5FTF3 Cluster: Ubiquinol-cytochrome C reductase
iron-sulfur subunit; n=1; Gluconobacter oxydans|Rep:
Ubiquinol-cytochrome C reductase iron-sulfur subunit -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 210
Score = 35.9 bits (79), Expect = 0.84
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 467 FVSSM-SAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKA 628
FV S+ + AA L+ +++ L+ + G+ +T +WR P+FI+ RT ++ +A
Sbjct: 38 FVESLKNPAATSLSDRLLDVDLSSLAPGQDITVRWRDWPVFIQRRTPQMLAALQA 92
>UniRef50_Q57456 Cluster: Slr0351 protein; n=2; Chroococcales|Rep:
Slr0351 protein - Synechocystis sp. (strain PCC 6803)
Length = 416
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 200 QKLQLWKLCMDPCRFRALKVKAGTXVPAQVRFAHTDISYPDFSA 331
Q L++W+ +P RF L++ AGT AQ A T YP+F A
Sbjct: 87 QFLEMWQRLGEPDRFDLLELGAGTGAFAQTVLAQTQRLYPEFFA 130
>UniRef50_O31214 Cluster: Ubiquinol-cytochrome c reductase
iron-sulfur subunit; n=104; Proteobacteria|Rep:
Ubiquinol-cytochrome c reductase iron-sulfur subunit -
Chromatium vinosum (Allochromatium vinosum)
Length = 207
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 467 FVSSMSAAADVLAL-AKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTA 604
FV+SM+ +A A A +E ++++ G + KWRG P+++ HR++
Sbjct: 43 FVASMNPSARARAAGAPVEADISKLEPGALLRVKWRGMPVWVVHRSS 89
>UniRef50_Q8DLR1 Cluster: Tlr0417 protein; n=1; Synechococcus
elongatus|Rep: Tlr0417 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 385
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 206 LQLWKLCMDPCRFRALKVKAGTXVPAQVRFAHTDISYPDFSAYRRKETQDPTSKANETID 385
+Q+W P RF L++ AG A+ ++ +YPDF A + Q+P+ E
Sbjct: 71 VQMWHALERPQRFTLLEMGAGEGQFAEGVLGYSQATYPDFFAALEYQIQEPSPSLRERQR 130
Query: 386 ER 391
+R
Sbjct: 131 QR 132
>UniRef50_Q19X65 Cluster: Gp232; n=2; unclassified Myoviridae|Rep:
Gp232 - Mycobacterium phage Catera
Length = 227
Score = 34.7 bits (76), Expect = 2.0
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = -1
Query: 243 NRQGSMQSFHS*SFWQ--GQDDRFLGGCW-YDHQRFQAVSYDLGRRLKIRGQMPSSYHRI 73
N G + HS ++W G D++F CW ++ F AV+ L + +++ GQ+ S H +
Sbjct: 133 NSVGGVIVTHSQTYWDLGGMDEKF-ERCWGFEDNAFVAVADTLAKVIRLPGQVYSFSHEV 191
Query: 72 HFVSIDYRQI 43
V D+ ++
Sbjct: 192 EGVGRDWSKL 201
>UniRef50_Q63QA2 Cluster: Ubiquinol-cytochrome c reductase
iron-sulfur subunit; n=37; Betaproteobacteria|Rep:
Ubiquinol-cytochrome c reductase iron-sulfur subunit -
Burkholderia pseudomallei (Pseudomonas pseudomallei)
Length = 207
Score = 34.3 bits (75), Expect = 2.6
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 467 FVSSMSAAADVLAL-AKIEIXLAEIPQGKSVTFKWRGKPLFIRHRT 601
F +S++ + A A +E+ + + G+ +T WRGKP+++ +RT
Sbjct: 36 FAASLAPSTKAKAAGAPVEVDIGALKPGEMLTVPWRGKPVWVLNRT 81
>UniRef50_Q5E2N1 Cluster: Ubiquinol-cytochrome c reductase
iron-sulfur subunit; n=2; Vibrio|Rep:
Ubiquinol-cytochrome c reductase iron-sulfur subunit -
Vibrio fischeri (strain ATCC 700601 / ES114)
Length = 171
Score = 34.3 bits (75), Expect = 2.6
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 467 FVSSMSAAADVLAL-AKIEIXLAEIPQGKSVTFKWRGKPLFIRHRT 601
F+ S + +A A A +E+ ++++ G+ V +WRGKP+++ R+
Sbjct: 33 FIKSWNPSAKAKAAGAPVEVDISKLEDGQMVRVEWRGKPVWVVRRS 78
>UniRef50_UPI00015C5770 Cluster: hypothetical protein CKO_01263;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_01263 - Citrobacter koseri ATCC BAA-895
Length = 183
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 515 IEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPV 637
+++ LA + G++V W+GK + I HRT EI + + V
Sbjct: 55 VDVSLAGVAVGQTVKRVWQGKLILIHHRTPEEIRSAQQADV 95
>UniRef50_A2SGV1 Cluster: Ubiquinol--cytochrome c reductase; n=1;
Methylibium petroleiphilum PM1|Rep:
Ubiquinol--cytochrome c reductase - Methylibium
petroleiphilum (strain PM1)
Length = 187
Score = 33.9 bits (74), Expect = 3.4
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 467 FVSSMSAAADVLALA-KIEIXLAEIPQGKSVTFKWRGKPLFIRHRT 601
FVS+ + + A +E+ L+++ G S T +WRGKP+++ RT
Sbjct: 47 FVSTFAPSERAKAAGGPVEVDLSDMATGGSKTVEWRGKPVWVVKRT 92
>UniRef50_Q7UJF4 Cluster: Protoheme IX farnesyltransferase; n=1;
Pirellula sp.|Rep: Protoheme IX farnesyltransferase -
Rhodopirellula baltica
Length = 389
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 130 VANSLKPLVVVPTPSEKTVVLPLPKTSTVETLHGSLPIQ 246
V+ S V+ PTP KTV P P T TL+ +P+Q
Sbjct: 34 VSASGSTAVLEPTPRMKTVSRPRPSTDRASTLNDEIPVQ 72
>UniRef50_P51767 Cluster: Baseplate assembly protein J; n=11;
root|Rep: Baseplate assembly protein J - Bacteriophage
P2
Length = 302
Score = 33.1 bits (72), Expect = 6.0
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = +1
Query: 34 KNNYLPIIYRNKMNSVVRAGHLAPYFKSSTQVVANSLKPLVVVPTPSEKTVVLPLPKTST 213
+N Y +I+R ++N RA LA + V+ + + TP++ + + P P
Sbjct: 60 ENAYRELIWRQRVNEAARAVMLACAAGNDLDVIGANYNTTRLTITPADDSTIPPTPAVME 119
Query: 214 VETLHGSLPIQGFEGQS 264
+T + Q FEG S
Sbjct: 120 SDTDYRLRIQQAFEGLS 136
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,093,202
Number of Sequences: 1657284
Number of extensions: 11784932
Number of successful extensions: 30401
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 29286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30372
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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