Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_I17
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   1.2  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   1.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   1.6  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   8.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 57  DYRQIIIFSLLFVVLVF 7
           DY+Q ++F L++ +L F
Sbjct: 157 DYKQPVVFDLVYFILAF 173


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = +1

Query: 145 KPLVVVPTPSEKTVVLPLPKTSTVETLHGSLPIQGFEG 258
           K   + P P +K +     K   +  + G  P+QG  G
Sbjct: 3   KSTKIFPVPGDKNLHKSYSKMLILAQIFGFFPVQGVRG 40


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = +1

Query: 145 KPLVVVPTPSEKTVVLPLPKTSTVETLHGSLPIQGFEG 258
           K   + P P +K +     K   +  + G  P+QG  G
Sbjct: 3   KSTKIFPVPGDKNLHKSYSKMLILAQIFGFFPVQGVRG 40


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 528 WLKFHKESLSPSNGEE 575
           WL  HK++  P+ GE+
Sbjct: 102 WLNEHKKNPYPTKGEK 117


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 310 FIPGFLGLPSQRN 348
           F+PG LGL S+ N
Sbjct: 206 FVPGVLGLLSRSN 218


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 310 FIPGFLGLPSQRN 348
           F+PG LGL S+ N
Sbjct: 206 FVPGVLGLLSRSN 218


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 310 FIPGFLGLPSQRN 348
           F+PG LGL S+ N
Sbjct: 206 FVPGVLGLLSRSN 218


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 310 FIPGFLGLPSQRN 348
           F+PG LGL S+ N
Sbjct: 206 FVPGVLGLLSRSN 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,204
Number of Sequences: 336
Number of extensions: 2817
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)