Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_I17
         (648 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-274|AAF51354.3|  230|Drosophila melanogaster CG7361-PB,...   134   7e-32
AE014134-273|AAF51353.1|  260|Drosophila melanogaster CG7361-PA,...   134   7e-32
BT010222-1|AAQ23540.1|  260|Drosophila melanogaster RH01528p pro...   132   4e-31

>AE014134-274|AAF51354.3|  230|Drosophila melanogaster CG7361-PB,
           isoform B protein.
          Length = 230

 Score =  134 bits (325), Expect = 7e-32
 Identities = 65/119 (54%), Positives = 84/119 (70%)
 Frame = +2

Query: 290 RFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHF 469
           R AHTD+  PDFSAYRR+  +D + + N+T +ER++F+YL+                  F
Sbjct: 34  RQAHTDLQVPDFSAYRRESVKD-SRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTF 92

Query: 470 VSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
           + SMSA+A+VLA+AKIEI L++IP+GKSVTFKWRGKPLFIRHRTA EI T + VP  TL
Sbjct: 93  IGSMSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTSTL 151


>AE014134-273|AAF51353.1|  260|Drosophila melanogaster CG7361-PA,
           isoform A protein.
          Length = 260

 Score =  134 bits (325), Expect = 7e-32
 Identities = 65/119 (54%), Positives = 84/119 (70%)
 Frame = +2

Query: 290 RFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHF 469
           R AHTD+  PDFSAYRR+  +D + + N+T +ER++F+YL+                  F
Sbjct: 34  RQAHTDLQVPDFSAYRRESVKD-SRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTF 92

Query: 470 VSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
           + SMSA+A+VLA+AKIEI L++IP+GKSVTFKWRGKPLFIRHRTA EI T + VP  TL
Sbjct: 93  IGSMSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTSTL 151


>BT010222-1|AAQ23540.1|  260|Drosophila melanogaster RH01528p
           protein.
          Length = 260

 Score =  132 bits (319), Expect = 4e-31
 Identities = 64/119 (53%), Positives = 83/119 (69%)
 Frame = +2

Query: 290 RFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHF 469
           R AHTD+  PDFSAYRR+  +D + + N+T +ER++F+YL+                  F
Sbjct: 34  RQAHTDLQVPDFSAYRRESVKD-SRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTF 92

Query: 470 VSSMSAAADVLALAKIEIXLAEIPQGKSVTFKWRGKPLFIRHRTAXEISTXKAVPVDTL 646
           + SMSA+A+VLA+AKIEI L++IP+GKSVTFKWRGKPLFIRH TA EI T + VP  TL
Sbjct: 93  IGSMSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHSTAAEIETERNVPTSTL 151


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,730,463
Number of Sequences: 53049
Number of extensions: 537486
Number of successful extensions: 1842
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1832
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)