Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_I11
         (648 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit Gsa1...    27   3.1  
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ...    26   4.1  
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po...    26   5.4  
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1...    25   9.4  

>SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit
           Gsa1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 498

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 455 KNTXKIYRYSFLAEYSVLHIEKRLIYKLSDYPLQ 556
           K++ K+Y  +    Y V  +  R+ Y L DYP Q
Sbjct: 269 KSSNKLYMKTSFTTYEVAVVYYRVGYALDDYPSQ 302


>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 926

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +2

Query: 386 ELYNLSNYTLSTFSEXGKYVLLTKNTXKIYRYSFLAEYSVLHIEKRLIYKLSD 544
           ELYN     L++  + G+Y  L K+   +       +Y++   EK  + KLS+
Sbjct: 656 ELYNAFKLQLTSLKQKGEYATLAKDAEAVQHIIEERDYAL--AEKADLLKLSE 706


>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 793

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +2

Query: 404 NYTLSTFSEXGKYVLLTKNTXKIYRYSFLAEYSVLHIEKR 523
           +Y   + S   KYVL++ N  + +R+S  A+Y + + E +
Sbjct: 118 DYDSYSISFDAKYVLVSVNKSQRWRHSSFAQYYLYNTETK 157


>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1004

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -1

Query: 450 SSTYFPXSENVDSV*LLKLYNSISLRIVTTLSVEASYXFIPPGSLYI 310
           SS ++  S N  ++ LL   NS+SL  ++T ++      IPP   ++
Sbjct: 387 SSPHYNGSHNPKNLLLLSEDNSLSLLDISTGNISNMSLSIPPSLCFL 433


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,561,166
Number of Sequences: 5004
Number of extensions: 48799
Number of successful extensions: 119
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)