Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_I11
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81575-10|CAB04640.1|  338|Caenorhabditis elegans Hypothetical p...    29   3.8  
AF024503-3|AAG24098.3|  331|Caenorhabditis elegans Serpentine re...    28   5.0  
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr...    28   6.6  
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re...    28   6.6  
AF016442-4|AAB65915.1|  361|Caenorhabditis elegans Serpentine re...    28   6.6  

>Z81575-10|CAB04640.1|  338|Caenorhabditis elegans Hypothetical
           protein R08H2.13 protein.
          Length = 338

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -1

Query: 504 TEYSARNEYLYIFXVFFVSSTYFPXS 427
           T +SA+N  +++F + F SST+F  S
Sbjct: 130 TRFSAKNSPIWVFLILFNSSTWFVLS 155


>AF024503-3|AAG24098.3|  331|Caenorhabditis elegans Serpentine
           receptor, class j protein6 protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = +3

Query: 459 IQXRYTDIHSLRSIPCYILKRD*STS*AIIRYKSWFGVLGNLXLTFXITMYTTYLTLPKQ 638
           ++  + ++H + S    +L      +   + YKSWFG+L +L L F     + YL L  +
Sbjct: 162 VRPAFKEVHHVNSDNISLLTGQYRNASNFVVYKSWFGIL-SLTL-FSCYCMSVYLVLGYK 219

Query: 639 IM 644
           IM
Sbjct: 220 IM 221


>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical
           protein F29D11.1 protein.
          Length = 4753

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +2

Query: 182 ICHTQSSAYIQGQKIFSLXEIXPLMAEFYPERMSVQWISXTTYIYKDPGGIXKYDAST 355
           + H+  SA +  +   S  +   L +  YP  ++V WI+ T YI +   G  + D S+
Sbjct: 444 LAHSAFSADVDDEGEISQIKKLSLKSLVYPRCLAVDWITNTLYIIE--SGSRRIDVSS 499


>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL
           receptor-related protein protein.
          Length = 4753

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +2

Query: 182 ICHTQSSAYIQGQKIFSLXEIXPLMAEFYPERMSVQWISXTTYIYKDPGGIXKYDAST 355
           + H+  SA +  +   S  +   L +  YP  ++V WI+ T YI +   G  + D S+
Sbjct: 444 LAHSAFSADVDDEGEISQIKKLSLKSLVYPRCLAVDWITNTLYIIE--SGSRRIDVSS 499


>AF016442-4|AAB65915.1|  361|Caenorhabditis elegans Serpentine
           receptor, class n protein1 protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -1

Query: 468 FXVFFVSSTYFPXSENVDSV*LLKLYNSISLRIVTTLSVEASYXFIPPGSLYIY 307
           F VF V+ ++    E+     L+K + +  + I   LSV  S+ FI P   Y++
Sbjct: 269 FPVFLVAFSFVMSYESDTFAELIKHFVTFVISIYPALSVMLSFIFIKPYRKYLF 322


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,180,081
Number of Sequences: 27780
Number of extensions: 269736
Number of successful extensions: 579
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)