Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_I10
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   6.7  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   6.7  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   6.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.8  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 439 VVIFNVKSCHFKIHPYNPLXYVNFSIF 359
           +V+ ++   HFKI    P  Y+N  I+
Sbjct: 200 MVVTHITMAHFKIIQVVPYCYINCLIY 226


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +2

Query: 569 ENAXCXTLCXNVFY*PKSIXFXTLISN 649
           E A   +L  N FY  K I    LISN
Sbjct: 18  EIAQLMSLIINTFYSNKEIFLRELISN 44


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 527 TLNKMNNWCKV 559
           T+ K N WCK+
Sbjct: 79  TITKRNQWCKL 89


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 527 TLNKMNNWCKV 559
           T+ K N WCK+
Sbjct: 79  TITKRNQWCKL 89


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 527 TLNKMNNWCKV 559
           T+ K N WCK+
Sbjct: 399 TITKRNQWCKL 409


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = -1

Query: 554 YTSYSFCLKSLQVDL*XYRDLSPLHLAVHLSQDTLFPLCGHFQCQVLSFQD 402
           Y  Y+F   S +V +       P++L+V +    L  +CG +     SF +
Sbjct: 143 YICYAFGKFSCKVMIQSVSFAFPINLSVPVLLSGLIAMCGMYYRDECSFAE 193


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = -1

Query: 554 YTSYSFCLKSLQVDL*XYRDLSPLHLAVHLSQDTLFPLCGHFQCQVLSFQD 402
           Y  Y+F   S +V +       P++L+V +    L  +CG +     SF +
Sbjct: 376 YICYAFGKFSCKVMIQSVSFAFPINLSVPVLLSGLIAMCGMYYRDECSFAE 426


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = -1

Query: 554 YTSYSFCLKSLQVDL*XYRDLSPLHLAVHLSQDTLFPLCGHFQCQVLSFQD 402
           Y  Y+F   S +V +       P++L+V +    L  +CG +     SF +
Sbjct: 376 YICYAFGKFSCKVMIQSVSFAFPINLSVPVLLSGLIAMCGMYYRDECSFAE 426


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,332
Number of Sequences: 336
Number of extensions: 3322
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)