Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_I10
         (650 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0150 - 15750329-15750450,15751554-15751644,15751967-157520...    77   2e-14
04_03_0268 - 13663387-13663505,13663935-13664025,13664788-136648...    50   1e-06
04_04_0491 - 25605560-25605684,25605826-25605928,25606026-256075...    31   1.1  
03_05_0187 - 21751374-21752631,21752958-21753399,21753914-21753962     30   1.4  
02_02_0522 - 11161385-11161537,11162513-11162668,11164176-111642...    28   7.4  

>02_03_0150 -
           15750329-15750450,15751554-15751644,15751967-15752053,
           15752605-15752660,15752812-15752893,15753141-15753217,
           15754028-15754138,15754744-15754906,15755375-15755433,
           15755882-15756011
          Length = 325

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 31/64 (48%), Positives = 42/64 (65%)
 Frame = +2

Query: 374 DIXQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIXINLPEVTLNKMNNWC 553
           D    +VW+DLEMTGLD+  D I+EIAC++TD +L     GPD+ IN  +  L+ M+ WC
Sbjct: 141 DYQMPLVWIDLEMTGLDVAKDRILEIACIITDGKLTKQIEGPDLVINQKKDLLDNMDEWC 200

Query: 554 KVQH 565
           K  H
Sbjct: 201 KTHH 204


>04_03_0268 -
           13663387-13663505,13663935-13664025,13664788-13664874,
           13665849-13665904,13666788-13666841,13667413-13667523,
           13668293-13668419
          Length = 214

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = +2

Query: 374 DIXQRIVWMDLEMTGLDIENDHIMEIACLVTD 469
           D  + +VW+DLEMTGLDI  D I+EIAC++TD
Sbjct: 66  DYDKPLVWIDLEMTGLDITKDRILEIACIITD 97


>04_04_0491 - 25605560-25605684,25605826-25605928,25606026-25607592,
            25608694-25610198
          Length = 1099

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/52 (36%), Positives = 31/52 (59%)
 Frame = -1

Query: 536  CLKSLQVDL*XYRDLSPLHLAVHLSQDTLFPLCGHFQCQVLSFQDPSIQSSE 381
            C K L V L   + +SP H ++ L ++ +  + G   C+VL FQ+PS+Q S+
Sbjct: 978  CHKKL-VSLRKLQHISPFH-SLRLRKELVQKVSG---CEVLPFQNPSVQDSQ 1024


>03_05_0187 - 21751374-21752631,21752958-21753399,21753914-21753962
          Length = 582

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -3

Query: 540 ILFKVTSGRFIXISGPVATTFSCASVTRHAISIMWSFSMSSP 415
           +L  V SG F  +S  VAT   C   TRHA  + + +S  +P
Sbjct: 257 VLSSVLSGFFQEVSSLVATGSPCTDTTRHAHLLDFLYSNMAP 298


>02_02_0522 -
           11161385-11161537,11162513-11162668,11164176-11164298,
           11164404-11164466,11164512-11164577,11165128-11165232,
           11165336-11165435,11165520-11165590,11166037-11166093,
           11167215-11167292,11167367-11167441,11168490-11168540,
           11169015-11169094,11169560-11169660,11169749-11169810,
           11170084-11170590
          Length = 615

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 268 YIQHDKIYVITKCNNVLNS*FVHVSENNDEK 360
           +++H + YV+TK  N L   +  + E ND K
Sbjct: 444 FVKHSRSYVLTKPKNALGRQYTKLFEMNDVK 474


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,845,516
Number of Sequences: 37544
Number of extensions: 248614
Number of successful extensions: 472
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)