Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_I10
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72502-5|CAA96590.1|  193|Caenorhabditis elegans Hypothetical pr...    78   5e-15
U55364-11|AAA97976.1|  196|Caenorhabditis elegans Hypothetical p...    29   2.2  
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z99286-2|CAH60793.1|  310|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AF016446-5|AAC24163.1|  329|Caenorhabditis elegans Serpentine re...    27   8.7  

>Z72502-5|CAA96590.1|  193|Caenorhabditis elegans Hypothetical
           protein C08B6.8 protein.
          Length = 193

 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 34/66 (51%), Positives = 46/66 (69%)
 Frame = +2

Query: 377 IXQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIXINLPEVTLNKMNNWCK 556
           I QRI+W+D EMTGLD+E   + EIA +VTD++LN +ATGPDI I+ P+  L+ M  W +
Sbjct: 11  IEQRIIWIDCEMTGLDVEKQTLCEIALIVTDSELNTIATGPDIVIHQPKEVLDNMEEWPR 70

Query: 557 VQHGEN 574
               EN
Sbjct: 71  NTFHEN 76


>U55364-11|AAA97976.1|  196|Caenorhabditis elegans Hypothetical
           protein F21C10.4 protein.
          Length = 196

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 418 SCHFKIHPYNPLXYVNFSIFFHHYFRRH 335
           S H  I P  P+ Y N   ++H Y+R H
Sbjct: 94  STHVIIQPATPIIYDNHHYYWHGYYRSH 121


>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
            C27F2.8 protein.
          Length = 1715

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 154  FRNSMYVM*CCTTINFIFFCVMTCSYVQHVKSIS 255
            F N MY   C T + F   CV+ C+Y++  ++I+
Sbjct: 1051 FENIMYYS-CVTALIFCLVCVLACAYLEGDRAIA 1083


>Z99286-2|CAH60793.1|  310|Caenorhabditis elegans Hypothetical
           protein Y7A9C.8 protein.
          Length = 310

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 448 FHYVVIFNVKSCHFKIHPYNPLXYVNFSIFFH 353
           F  + +F+ +  + ++ PY P  Y  F +FFH
Sbjct: 161 FIILCVFSSRVKYERVDPYKPPCYYGFILFFH 192


>AF016446-5|AAC24163.1|  329|Caenorhabditis elegans Serpentine
           receptor, class h protein22 protein.
          Length = 329

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 5/117 (4%)
 Frame = -3

Query: 510 IXISGPVATTFSCASVTRHAISIMWSFS---MSSPVISRSIHTIL*XMSTLVFFFIIIFG 340
           + +S P    F   S+++ A    W      + S VI  SIH+I+  +   +F +   FG
Sbjct: 208 LFLSIPGTAIFINLSISKSASESTWKIQKNLLKSLVIQASIHSIMMGVPNGMFNYAFFFG 267

Query: 339 DMDKLRVKNVIALRDNVDFIMLYVIVLM*N--RLYMLNVTACHYTKKNEINSCTTLH 175
             ++        +     F+  + +++     R Y+L       T   ++ S T+LH
Sbjct: 268 YENESLAYGAFVILTYHGFVSTFALIIFTKPLREYLLIAFKMKKTATQKV-SMTSLH 323


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,397,258
Number of Sequences: 27780
Number of extensions: 269999
Number of successful extensions: 626
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)